RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ZNF648Q5T619 568 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 KIAA1161Q6NSJ0 714 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PNCKQ6P2M8 343 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 UBE2R2Q712K3 238 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 RPS27LQ71UM5 84 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 ADGRG6Q86SQ4 1221 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CACUL1Q86Y37 369 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 TMPRSS6Q8IU80 811 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 AGAP11Q8TF27 550 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 UBTD2Q8WUN7 234 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 SKA2Q8WVK7 121 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 ASB11Q8WXH4 323 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HLA-CQ95604 372 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 TMEM159Q96B96 161 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 KLHL29Q96CT2 875 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HIC2Q96JB3 615 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 MAELQ96JY0 434 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HIST1H2AHQ96KK5 128 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 NSUN5Q96P11 429 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HIST1H2AJQ99878 128 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 H2AFJQ9BTM1 129 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 HGH1Q9BTY7 390 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 CCDC106Q9BWC9 280 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 SLC12A9Q9BXP2 914 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 MKRN2Q9H000 416 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 MEAF6Q9HAF1 191 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PARVBQ9HBI1 364 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PFDN4Q9NQP4 134 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 EIF2B4Q9UI10 523 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 LNPEPQ9UIQ6 1025 aa12.25□□□□□ -0.45
SHMT2-233ENST00000557529 MBD1Q9UIS9 605 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 PTBP2Q9UKA9 531 aaKnown RBP12.25□□□□□ -0.45
SHMT2-233ENST00000557529 GOLGA8QA0A0J9YX86 632 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 GOLGA8OA6NCC3 632 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 GOLGA8NF8WBI6 632 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 K7ESM1 405 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SOX1O00570 391 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 E2F3O00716 465 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SDHDO14521 159 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 LIN7AO14910 233 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SLC22A2O15244 555 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PLRG1O43660 514 aaKnown RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 CRCPO75575 148 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 CBX6O95503 412 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ANXA5P08758 320 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 T-ENOLP0DO92 83 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ESRRAP11474 423 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SRFP11831 508 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 TSPAN8P19075 237 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 AOC1P19801 751 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 NCF2P19878 526 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PIK3CGP48736 1102 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 AGTR2P50052 363 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 CTSCP53634 463 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 RPS21P63220 83 aaKnown RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 BTKQ06187 659 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SMAD2Q15796 467 aaKnown RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PHKG1Q16816 387 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 USP30Q70CQ3 517 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ASRGL1Q7L266 308 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 KBTBD6Q86V97 674 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PELI3Q8N2H9 469 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 CHCHD4Q8N4Q1 142 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 CEP70Q8NHQ1 597 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 MCOLN3Q8TDD5 553 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 FAM3CQ92520 227 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 RHBDF1Q96CC6 855 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PTCD3Q96EY7 689 aaKnown RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PRR11Q96HE9 360 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 OR52B2Q96RD2 323 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ZNF382Q96SR6 550 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 C1QTNF7Q9BXJ2 289 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 LRMDAQ9H2I8 198 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 WDR55Q9H6Y2 383 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PREBQ9HCU5 417 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SEMA4BQ9NPR2 832 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ARL8BQ9NVJ2 186 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 WWOXQ9NZC7 414 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 ARMCX1Q9P291 453 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 SERGEFQ9UGK8 458 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 FZD4Q9ULV1 537 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 NCKAP1Q9Y2A7 1128 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 FIS1Q9Y3D6 152 aa12.24□□□□□ -0.45
SHMT2-233ENST00000557529 PIKFYVEQ9Y2I7 2098 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 C17orf113A0A1B0GUU1 675 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 SLC5A10A0PJK1 596 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 E9PBE3 544 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 H0YHG0 523 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 GFYI3L273 518 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 MYO1CO00159 1063 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 MAN2B1O00754 1011 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 KLHL41O60662 606 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms