RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 BIRC2Q13490 618 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 USP10Q14694 798 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SDR16C5Q8N3Y7 309 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 OR4C6Q8NH72 309 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 OR2W6PQ8NHA6 318 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 ASZ1Q8WWH4 475 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC44A1Q8WWI5 657 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC30A3Q99726 388 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 OLFM1Q99784 485 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 DUSP23Q9BVJ7 150 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 WDR37Q9Y2I8 494 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 MED16Q9Y2X0 877 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 CFAP20Q9Y6A4 193 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 PCDH15Q96QU1 1955 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 OR52A4PA6NMU1 304 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 TPP1O14773 563 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 KPNA5O15131 536 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 ITGA2BP08514 1039 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 GIMD1P0DJR0 217 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 F3P13726 295 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 CLCN7P51798 805 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 TTLL9Q3SXZ7 439 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 MROH9Q5TGP6 573 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 UGT3A1Q6NUS8 523 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 TAOK1Q7L7X3 1001 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 KYQ8NBH2 561 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 GIMAP7Q8NHV1 300 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 IMP3Q9NV31 184 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SCHIP1Q9P0W5 487 aaPredicted RBP13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 ACSL5Q9ULC5 683 aa13.76□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC5A10A0PJK1 596 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 IFRD1O00458 451 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 TAS2R39P59534 338 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 ZNF460Q14592 562 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 ZNF658BQ4V348 819 aaPredicted RBP13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 ZCCHC8Q6NZY4 707 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 XKR5Q6UX68 686 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 VRK3Q8IV63 474 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 NAGSQ8N159 534 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 ARL10Q8N8L6 244 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 C12orf66Q96MD2 445 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 MCMBPQ9BTE3 642 aa13.75□□□□□ -0.21
VIPAS39-208ENST00000556412 PRR19A6NJB7 356 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC2A4P14672 509 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 BRAFP15056 766 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 FDXRP22570 491 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 DAB2P98082 770 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 PLOD1Q02809 727 aaPredicted RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 RPA4Q13156 261 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 KRT33BQ14525 404 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 CLCA4Q14CN2 919 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 ACSBG2Q5FVE4 666 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 PLEKHS1Q5SXH7 462 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 DUS1LQ6P1R4 473 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC35F3Q8IY50 421 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 MREGQ8N565 214 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 CFAP61Q8NHU2 1237 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 MAPK15Q8TD08 544 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 SLC37A2Q8TED4 501 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 DCAKDQ8WVC6 231 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 GLMNQ92990 594 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 CXorf40BQ96DE9 158 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 APOLD1Q96LR9 279 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 RMDN2Q96LZ7 410 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 GPR22Q99680 433 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 TBK1Q9UHD2 729 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 DHRS7Q9Y394 339 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 TLDC2A0PJX2 215 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 A6NCN8 305 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 PHGDHO43175 533 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 GPC4O75487 556 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 KRT38O76015 456 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 STMN1P16949 149 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 SERPINB9P50453 376 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 TIAL1Q01085 375 aaKnown RBP eCLIP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 POU4F1Q01851 419 aa13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 ILF2Q12905 390 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-208ENST00000556412 ABRQ12979 859 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms