RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SLC22A15Q8IZD6 547 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 C4orf33Q8N1A6 199 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 FSTL5Q8N475 847 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-210ENST00000553950 PNPLA1Q8N8W4 532 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 BANPQ8N9N5 519 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ACVR1CQ8NER5 493 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 GIMAP7Q8NHV1 300 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 LKAAEAR1Q8TD35 194 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 OR1E3Q8WZA6 343 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ARL8AQ96BM9 186 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 UBXN10Q96LJ8 280 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 ZDHHC5Q9C0B5 715 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 KCNH6Q9H252 994 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 TMCO1Q9UM00 188 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 GPSM3Q9Y4H4 160 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 TMEM131Q92545 1883 aa14.24□□□□□ -0.13
SHMT2-210ENST00000553950 SLC5A10A0PJK1 596 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 SYCE1LA8MT33 242 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 GOLGA8RI6L899 631 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 IFRD1O00458 451 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 DFNA5O60443 496 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 GPC4O75487 556 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 SLCO2B1O94956 709 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 EPN2O95208 641 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 C8GP07360 202 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 ENO2P09104 434 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 RBP1P09455 135 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 ACP5P13686 325 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 NME1P15531 152 aaKnown RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 NR1D1P20393 614 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 MAOBP27338 520 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 HNRNPKP61978 463 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 HSPA14Q0VDF9 509 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 FZD2Q14332 565 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 CSHL1Q14406 222 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 ZNF460Q14592 562 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 ACAP2Q15057 778 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 DUOXA1Q1HG43 343 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 PLA2G4EQ3MJ16 856 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 IL27RAQ6UWB1 636 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 CHST15Q7LFX5 561 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 C11orf96Q7Z7L8 435 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 HID1Q8IV36 788 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 AVL9Q8NBF6 648 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 RHEBL1Q8TAI7 183 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 RDH11Q8TC12 318 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 FAM136AQ96C01 138 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 SELENOSQ9BQE4 189 aa14.23□□□□□ -0.13
SHMT2-210ENST00000553950 APOBEC3BQ9UH17 382 aaKnown RBP14.23□□□□□ -0.13
SHMT2-210ENST00000553950 GON4LQ3T8J9 2241 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 SLC16A5O15375 505 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 KDM1AO60341 852 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 CSF2P04141 144 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 WNT1P04628 370 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 CTSEP14091 401 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 IDSP22304 550 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 HALP42357 657 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 ARRB1P49407 418 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 PPP2R2AP63151 447 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 TIAL1Q01085 375 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 ELOCQ15369 112 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 ZNF658BQ4V348 819 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 LAIR1Q6GTX8 287 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 UNC5DQ6UXZ4 953 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 KDM7AQ6ZMT4 941 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 SH2D5Q6ZV89 423 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 FRA10AC1Q70Z53 315 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 PDZD3Q86UT5 571 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 MAGEC3Q8TD91 643 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 KCTD4Q8WVF5 259 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 SKA2Q8WVK7 121 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 PIGKQ92643 395 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 MRPL46Q9H2W6 279 aaKnown RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 OSGEPL1Q9H4B0 414 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 TFB2MQ9H5Q4 396 aaKnown RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 KCNK9Q9NPC2 374 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 MRPL40Q9NQ50 206 aaKnown RBP14.22□□□□□ -0.13
SHMT2-210ENST00000553950 DNAJC28Q9NX36 388 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 SPASTQ9UBP0 616 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 HEBP2Q9Y5Z4 205 aa14.22□□□□□ -0.13
SHMT2-210ENST00000553950 TDRD6O60522 2096 aaKnown RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 RALGAPA1Q6GYQ0 2036 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TMEM120BA0PK00 339 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 BTN3A1O00481 513 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TYROBPO43914 113 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 KERAO60938 352 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 CATP04040 527 aaKnown RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 SYPP08247 313 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 CD1DP15813 335 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 JUNDP17535 347 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TAC1P20366 129 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 CYP2A7P20853 494 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 IRF9Q00978 393 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 EIF2B5Q13144 721 aaKnown RBP14.21□□□□□ -0.13
SHMT2-210ENST00000553950 ACSBG2Q5FVE4 666 aa14.21□□□□□ -0.13
SHMT2-210ENST00000553950 TPRG1LQ5T0D9 272 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms