RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CXorf40BQ96DE9 158 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 DPYSL5Q9BPU6 564 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 LRRN3Q9H3W5 708 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CAAP1Q9H8G2 361 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 XAB2Q9HCS7 855 aaKnown RBP8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CASS4Q9NQ75 786 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 KCNK4Q9NYG8 393 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 RIMKLBQ9ULI2 386 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 TCAF1Q9Y4C2 921 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 PLEKHM1Q9Y4G2 1056 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 KNL1Q8NG31 2342 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 DOCK9Q9BZ29 2069 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
PSEN1-209ENST00000553855 ATRXP46100 2492 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 MAGEB16A2A368 324 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 IFRD1O00458 451 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 DUX1O43812 170 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 CSO75390 466 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 AP2A2O94973 939 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 FTH1P02794 183 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 GSTM1P09488 218 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SLC35G4P0C7Q5 338 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 OR56A5P0C7T3 313 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 ATP1B2P14415 290 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 ACRV1P26436 265 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 RBMS1P29558 406 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 NSG1P42857 185 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 INHBCP55103 352 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 GPLD1P80108 840 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 XIAPP98170 497 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 DR1Q01658 176 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 GSTM4Q03013 218 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 ITIH4Q14624 930 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 ARMC3Q5W041 872 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 IYDQ6PHW0 289 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SDCCAG8Q86SQ7 713 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 PIM3Q86V86 326 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SERPINA9Q86WD7 417 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 KLHL7Q8IXQ5 586 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 RBM12BQ8IXT5 1001 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 PPIL6Q8IXY8 311 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 NAGSQ8N159 534 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 DCBLD1Q8N8Z6 715 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 RASGEF1AQ8N9B8 481 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 GLIS1Q8NBF1 620 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 OR4L1Q8NH43 312 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 GSDMBQ8TAX9 411 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 HDAC10Q969S8 669 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 RHOVQ96L33 236 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 EPB41L1Q9H4G0 881 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 FAM96AQ9H5X1 160 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SARS2Q9NP81 518 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 POT1Q9NUX5 634 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 TBC1D29Q9UFV1 150 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 ACSL5Q9ULC5 683 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 U3KQA8 63 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
PSEN1-209ENST00000553855 CNOT1A5YKK6 2376 aaKnown RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 TP53BP1Q12888 1972 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-209ENST00000553855 TRABD2BA6NFA1 517 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MGAT4DA6NG13 374 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SDR42E2A6NKP2 422 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CCL22O00626 93 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 KDM1AO60341 852 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 NDUFS3O75489 264 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CPNE6O95741 557 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 GOT2P00505 430 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 TUBB4AP04350 444 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 PROS1P07225 676 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MLNP12872 115 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 AMD1P17707 334 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MGAT1P26572 445 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 RPL10P27635 214 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 GRIA1P42261 906 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MAPK9P45984 424 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 FASLGP48023 281 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 TTPAP49638 278 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CCL7P80098 99 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 CKAP4Q07065 602 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 EIF3IQ13347 325 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 THOC5Q13769 683 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 DBN1Q16643 649 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 BCL7AQ4VC05 210 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 SYTL3Q4VX76 610 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 DNAJC21Q5F1R6 531 aaKnown RBP8.18□□□□□ -1.1
PSEN1-209ENST00000553855 PHF19Q5T6S3 580 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 AGAP9Q5VTM2 703 aa8.18□□□□□ -1.1
PSEN1-209ENST00000553855 MRNIPQ6NTE8 343 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms