RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NFIL3Q16649 462 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 CYP2A13Q16696 494 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 KRTCAP3Q53RY4 240 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ZFYVE27Q5T4F4 411 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 IRGCQ6NXR0 463 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 FAM92BQ6ZTR7 304 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 DRC7Q8IY82 874 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ZNF683Q8IZ20 524 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 DSELQ8IZU8 1212 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 GOT1L1Q8NHS2 421 aaPredicted RBP5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SHC3Q92529 594 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 NUS1Q96E22 293 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SLC41A2Q96JW4 573 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SMR3AQ99954 134 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ATP13A3Q9H7F0 1226 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 RMI1Q9H9A7 625 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 FANCEQ9HB96 536 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ZBTB20Q9HC78 741 aaPredicted RBP5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SEPT11Q9NVA2 429 aaKnown RBP5.05□□□□□ -1.6
CKAP4-203ENST00000553039 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SEMA5BQ9P283 1151 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 TBC1D29Q9UFV1 150 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ST6GALNAC2Q9UJ37 374 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 SH3BGRL2Q9UJC5 107 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM98Q9Y2Y6 226 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 COQ4Q9Y3A0 265 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ST14Q9Y5Y6 855 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 ACTL7AQ9Y615 435 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 CLIC4Q9Y696 253 aa5.05□□□□□ -1.6
CKAP4-203ENST00000553039 HIVEP2P31629 2446 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MAP1AP78559 2803 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 TRAV17A0A0B4J275 112 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 A8MX80 341 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 E5RJQ4 531 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ARHGEF9O43307 516 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 KIF1CO43896 1103 aaKnown RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PRKD3O94806 890 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 LY6G6DO95868 133 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CYP2A6P11509 494 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 NAT1P18440 290 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CD247P20963 164 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 UGT1A4P22310 534 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ACVRL1P37023 503 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 FOLR3P41439 243 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CLCNKAP51800 687 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 YBEYP58557 167 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ARG2P78540 354 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DEUP1Q05D60 604 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DPTQ07507 201 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 BCL2L1Q07817 233 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 NSUN2Q08J23 767 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 STK4Q13043 487 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PAK1Q13153 545 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MYBPHQ13203 477 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 GPS2Q13227 327 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 GBX1Q14549 363 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SLC39A14Q15043 492 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SETDB1Q15047 1291 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 NCF4Q15080 339 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 TAF5Q15542 800 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM95Q3KNT9 176 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MINDY4Q4G0A6 757 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SLC35F1Q5T1Q4 408 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PRAMEF13Q5VWM6 474 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MLIPQ5VWP3 458 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 RAET1GQ6H3X3 334 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PLEKHA7Q6IQ23 1121 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 RWDD4Q6NW29 188 aaKnown RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PODNL1Q6PEZ8 512 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DOK6Q6PKX4 331 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ISLR2Q6UXK2 745 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 LEKR1Q6ZMV7 388 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SPOCD1Q6ZMY3 1216 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 C11orf57Q6ZUT1 292 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MARK2Q7KZI7 788 aaKnown RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DPPA4Q7L190 304 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MRGPREQ86SM8 312 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CAMK1DQ8IU85 385 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SPPL2CQ8IUH8 684 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PHYKPLQ8IUZ5 450 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DMRTC2Q8IXT2 367 aaPredicted RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CLYBLQ8N0X4 340 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 D2HGDHQ8N465 521 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 KCT2Q8NC54 265 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 RNF214Q8ND24 703 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MYRIPQ8NFW9 859 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 EXD1Q8NHP7 514 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 SUN3Q8TAQ9 357 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 ASB5Q8WWX0 329 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CCDC47Q96A33 483 aaKnown RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 DHX58Q96C10 678 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 COQ10AQ96MF6 247 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 PLEKHG4BQ96PX9 1271 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 CD180Q99467 661 aa5.04□□□□□ -1.6
CKAP4-203ENST00000553039 POLDIP3Q9BY77 421 aaKnown RBP5.04□□□□□ -1.6
CKAP4-203ENST00000553039 KCTD10Q9H3F6 313 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms