RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 WDR83Q9BRX9 315 aaKnown RBP14.78□□□□□ -0.04
CUX1-214ENST00000550008 SH3GLB1Q9Y371 365 aa14.78□□□□□ -0.04
CUX1-214ENST00000550008 RFPL2O75678 378 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 SOD2P04179 222 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 ANXA4P09525 319 aaPredicted RBP14.77□□□□□ -0.04
CUX1-214ENST00000550008 HLA-EP13747 358 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 PCYT1AP49585 367 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 CYP4F3Q08477 520 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 GRB7Q14451 532 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 TECRLQ5HYJ1 363 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 CES5AQ6NT32 575 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 FEM1AQ9BSK4 669 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 TMCO1Q9UM00 188 aa14.77□□□□□ -0.04
CUX1-214ENST00000550008 ALDH1A2O94788 518 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 MYCLP1P12525 358 aaPredicted RBP14.77□□□□□ -0.05
CUX1-214ENST00000550008 ADSLP30566 484 aaPredicted RBP14.77□□□□□ -0.05
CUX1-214ENST00000550008 ADGRE1Q14246 886 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 TJAP1Q5JTD0 557 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 ZNF678Q5SXM1 525 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 CPTPQ5TA50 214 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 ABRAXAS1Q6UWZ7 409 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 OR52J3Q8NH60 311 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 RAPGEFL1Q9UHV5 662 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 K7EPI3 171 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 TP73O15350 636 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 TEX28O15482 410 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 CYP11A1P05108 521 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 PCCBP05166 539 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 ANO7Q6IWH7 933 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 CYP20A1Q6UW02 462 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 LINC01465Q8N7H1 131 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 SLC47A1Q96FL8 570 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 OSER1Q9NX31 292 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 PRKAB1Q9Y478 270 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 SPO11Q9Y5K1 396 aa14.77□□□□□ -0.05
CUX1-214ENST00000550008 LOC100506127A0A0U1RQW1 187 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 LOC730098B7Z3J9 87 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SLC31A1O15431 190 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 MAN1A2O60476 641 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 OAS1P00973 400 aaKnown RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 DHRS4L1P0CG22 281 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 NR1H2P55055 460 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TAZQ16635 292 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 CARD16Q5EG05 197 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 DEPDC1Q5TB30 811 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SULT1C3Q6IMI6 304 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 CAPN13Q6MZZ7 669 aaPredicted RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 MBOAT1Q6ZNC8 495 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TBC1D21Q8IYX1 336 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KLHDC9Q8NEP7 349 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 FERD3LQ96RJ6 166 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 CHID1Q9BWS9 393 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 FAM192AQ9GZU8 254 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KRT84Q9NSB2 600 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 C3orf18Q9UK00 162 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 GMPPBQ9Y5P6 360 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 ELOVL7A1L3X0 281 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 LCHNA4D1U4 455 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KDM1AO60341 852 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 PTPRRQ15256 657 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 PLEKHG6Q3KR16 790 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SFT2D3Q587I9 215 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TTC23Q5W5X9 447 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 CNKSR3Q6P9H4 555 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 APLFQ8IW19 511 aaPredicted RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 OR10G6Q8NH81 332 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SLC13A3Q8WWT9 602 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TMEM175Q9BSA9 504 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 NLNQ9BYT8 704 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 PNPLA3Q9NST1 481 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 B4GALT6Q9UBX8 382 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 UPK3BL1B0FP48 263 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 UPK3BL2E5RIL1 263 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 hCG_2039718K7EN88 272 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 G6PDP11413 515 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TYRP14679 529 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 LEPRP48357 1165 aaKnown RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 TRPC1P48995 793 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SEC13P55735 322 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 RPS7P62081 194 aaKnown RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 ERVK-8P63133 956 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KCTD21Q4G0X4 260 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 LIN52Q52LA3 116 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 SLC44A4Q53GD3 710 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 CHST15Q7LFX5 561 aaPredicted RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 SATL1Q86VE3 508 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KBTBD2Q8IY47 623 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KIAA1191Q96A73 305 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 LRRC58Q96CX6 371 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 DHRS4Q9BTZ2 278 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 MAGEL2Q9UJ55 1249 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 RUNX1T1Q06455 604 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 KRT78Q8N1N4 520 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 BEND7Q8N7W2 519 aaPredicted RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 C12orf76Q8N812 135 aaPredicted RBP14.76□□□□□ -0.05
CUX1-214ENST00000550008 PROX1Q92786 737 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 PPCDCQ96CD2 204 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 TDP1Q9NUW8 608 aa14.76□□□□□ -0.05
CUX1-214ENST00000550008 C1orf109Q9NX04 203 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms