RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 NAT14Q8WUY8 206 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 HMGB4Q8WW32 186 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 GLMNQ92990 594 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 SORT1Q99523 831 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 ERVK-6Q9BXR3 956 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 OSBPL6Q9BZF3 934 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 WDR26Q9H7D7 661 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 RMI1Q9H9A7 625 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 RDH14Q9HBH5 336 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 NPHS2Q9NP85 383 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 KCNK4Q9NYG8 393 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 OARD1Q9Y530 152 aa13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-214ENST00000549613 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SUPT7LO94864 414 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 IGLV3-19P01714 112 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 HOXC4P09017 264 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 ZNF8P17098 575 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 VCLP18206 1134 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 CYP2A7P20853 494 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 RPL14P50914 215 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SP140Q13342 867 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 FGL2Q14314 439 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 INPP5AQ14642 412 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 TGFBIQ15582 683 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 ARL13AQ5H913 290 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 ZNF678Q5SXM1 525 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SULT1C3Q6IMI6 304 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 Q6ZS52 159 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 TRIM74Q86UV6 250 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 TRAPPC5Q8IUR0 188 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SIX5Q8N196 739 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 KLK6Q92876 244 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 FAR2Q96K12 515 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 FOPNLQ96NB1 174 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 TMEM237Q96Q45 408 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 C20orf27Q9GZN8 174 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 STN1Q9H668 368 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 ZNF395Q9H8N7 513 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 MBNL1Q9NR56 388 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 USP36Q9P275 1121 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 VTI1BQ9UEU0 232 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 HAO1Q9UJM8 370 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 PIEZO1Q92508 2521 aa13.44□□□□□ -0.26
CALCOCO1-214ENST00000549613 SLC5A10A0PJK1 596 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 MGAT4DA6NG13 374 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 CACNB4O00305 520 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 CHUKO15111 745 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 SLC31A1O15431 190 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 FFAR2O15552 330 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 KCNJ13O60928 360 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 ZNF217O75362 1048 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 SEMA4FO95754 770 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 KITP10721 976 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 MYCLP1P12525 358 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 NUDT1P36639 197 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 CCR5P51681 352 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 CDKL1Q00532 357 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 FZD5Q13467 585 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 SETDB1Q15047 1291 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 SBSNQ6UWP8 590 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 FRMD7Q6ZUT3 714 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 UBE2R2Q712K3 238 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 LRRTM4Q86VH4 590 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 HOMEZQ8IX15 550 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 TCAIMQ8N3R3 496 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 BEND7Q8N7W2 519 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 RFWD2Q8NHY2 731 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 HM13Q8TCT9 377 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 C10orf82Q8WW14 230 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 APOOQ9BUR5 198 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 C1QTNF3Q9BXJ4 246 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 SLC12A9Q9BXP2 914 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 WWP1Q9H0M0 922 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 PNPOQ9NVS9 261 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 EBF1Q9UH73 591 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 DCTN4Q9UJW0 460 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 APOBEC2Q9Y235 224 aaKnown RBP13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 TMEM98Q9Y2Y6 226 aa13.43□□□□□ -0.26
CALCOCO1-214ENST00000549613 A0A0G2JND7 137 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 ERICH4A6NGS2 130 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 CCT8L1PA6NM43 557 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 GFYI3L273 518 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 STK25O00506 426 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 TOR1BO14657 336 aa13.42□□□□□ -0.26
CALCOCO1-214ENST00000549613 FPGTO14772 594 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms