RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 HABP4Q5JVS0 413 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 C1orf53Q5VUE5 145 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 MILR1Q7Z6M3 343 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 IFNEQ86WN2 208 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 ZFAND4Q86XD8 727 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 ANKFN1Q8N957 763 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 LYSMD1Q96S90 227 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 HTATIP2Q9BUP3 242 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 TRIM15Q9C019 465 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 ALG2Q9H553 416 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 ACTL8Q9H568 366 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 INTS7Q9NVH2 962 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 HECAQ9UBI9 543 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 SUN2Q9UH99 717 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 MYOCOSA0A1B0GUC4 107 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 AGAP14A8MT82 685 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 FESP07332 822 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 C8AP07357 584 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 CLTBP09497 229 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 CTSAP10619 480 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 G6PDP11413 515 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 MTHFD1P11586 935 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 BMP2P12643 396 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 OXTRP30559 389 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 EMX2Q04743 252 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 LIPEQ05469 1076 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 NR6A1Q15406 480 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 AAK1Q2M2I8 961 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 SPATS1Q496A3 300 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 RFTN2Q52LD8 501 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 TBCELQ5QJ74 424 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 LRRC66Q68CR7 880 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 LILRA6Q6PI73 481 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 SLC2A7Q6PXP3 512 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 RFLNAQ6ZTI6 216 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 METTL3Q86U44 580 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 AHI1Q8N157 1196 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 YME1L1Q96TA2 773 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 EGFL8Q99944 293 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 SPATA16Q9BXB7 569 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 CCL26Q9Y258 94 aa18.22■□□□□ 0.51
PRPF40B-208ENST00000548436 PABPC4LP0CB38 370 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 HMOX2P30519 316 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SNRPD1P62314 119 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PRKCQQ04759 706 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PRKG2Q13237 762 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 AP5B1Q2VPB7 878 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 MYLK3Q32MK0 819 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 NANOGP8Q6NSW7 305 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 IYDQ6PHW0 289 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SATL1Q86VE3 508 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CHERPQ8IWX8 916 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 RHBDF1Q96CC6 855 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SCRN2Q96FV2 425 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CORO1BQ9BR76 489 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CD244Q9BZW8 370 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ABCG8Q9H221 673 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 NANOGQ9H9S0 305 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 USP22Q9UPT9 525 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CCL27Q9Y4X3 112 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SOCS2O14508 198 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ANKRD28O15084 1053 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 RSL1D1O76021 490 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 FAM58BPP0C7Q3 252 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ACRP10323 421 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SOX11P35716 441 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PPM1AP35813 382 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CCR2P41597 374 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PIK3CGP48736 1102 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PTSQ03393 145 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 INPP5AQ14642 412 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CNPY1Q3B7I2 92 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ASTLQ6HA08 431 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 CYP20A1Q6UW02 462 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 MBOAT1Q6ZNC8 495 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 PTRH1Q86Y79 214 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ADGRG5Q8IZF4 528 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ECHDC3Q96DC8 303 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 KCTD14Q9BQ13 255 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 SUV39H2Q9H5I1 410 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 ZNF696Q9H7X3 374 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 TMEM45AQ9NWC5 275 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 WWOXQ9NZC7 414 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 RNF11Q9Y3C5 154 aa18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 POLR3HQ9Y535 204 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-208ENST00000548436 HNRNPRO43390 633 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 AHCYL1O43865 530 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 TNFAIP8O95379 198 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 NCK1P16333 377 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 PSMC3P17980 439 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 LHCGRP22888 699 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 CREB5Q02930 508 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 SULT1C3Q6IMI6 304 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 C22orf39Q6P5X5 142 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 ZBTB49Q6ZSB9 765 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 GPR65Q8IYL9 337 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC22A17Q8WUG5 538 aa18.2■□□□□ 0.5
PRPF40B-208ENST00000548436 ISG20Q96AZ6 181 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms