RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PCNX2A6NKB5 2137 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 SPAARA0A1B0GVQ0 90 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 UBA6A0AVT1 1052 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 H3BM21 787 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 YKT6O15498 198 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 FLRT2O43155 660 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 AQP9O43315 295 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 RASGRP1O95267 797 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 MYF5P13349 255 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 GNPDA1P46926 289 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 WDR4P57081 412 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 DCDC1P59894 354 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 RAB10P61026 200 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 GNGT1P63211 74 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 ZKSCAN8Q15776 578 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 ATP13A5Q4VNC0 1218 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TAF1BQ53T94 588 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 HHATQ5VTY9 493 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 FAM45BPQ6NSW5 357 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 ZNF549Q6P9A3 640 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 RAPH1Q70E73 1250 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 SERPINA9Q86WD7 417 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CEP97Q8IW35 865 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 RAVER1Q8IY67 606 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 TRAM1L1Q8N609 369 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 FAM45AQ8TCE6 357 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 DTX3LQ8TDB6 740 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 COX14Q96I36 57 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 AARSD1Q9BTE6 412 aaKnown RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 SLC17A7Q9P2U7 560 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 NFKBIL1Q9UBC1 381 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-227ENST00000548080 CRLS1Q9UJA2 301 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 GRID1Q9ULK0 1009 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PLLPQ9Y342 182 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PLEKHM1Q9Y4G2 1056 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 PCDHGB2Q9Y5G2 931 aa17.12■□□□□ 0.33
HDAC7-227ENST00000548080 BPTFQ12830 3046 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 AGAP14A8MT82 685 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 TRIM38O00635 465 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 PHGDHO43175 533 aaKnown RBP17.11■□□□□ 0.33
HDAC7-227ENST00000548080 GLRA3O75311 464 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 KCNK5O95279 499 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 GSTA1P08263 222 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 HOXC4P09017 264 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-227ENST00000548080 SDHBP21912 280 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 TEAD1P28347 426 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 FMO4P31512 558 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 GRK6P43250 576 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 DBN1Q16643 649 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 KHDC1Q4VXA5 237 aaKnown RBP17.11■□□□□ 0.33
HDAC7-227ENST00000548080 LVRNQ6Q4G3 990 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 NLRP8Q86W28 1048 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 CCL4L1Q8NHW4 92 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 NAT14Q8WUY8 206 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 DYDC1Q8WWB3 177 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 OLFM1Q99784 485 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 PAIP2Q9BPZ3 127 aaKnown RBP17.11■□□□□ 0.33
HDAC7-227ENST00000548080 ZSCAN5AQ9BUG6 496 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 TMEM168Q9H0V1 697 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 CCDC68Q9H2F9 335 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 ACOT9Q9Y305 439 aa17.11■□□□□ 0.33
HDAC7-227ENST00000548080 GOLGA4Q13439 2230 aaKnown RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 A0A087X1B8 175 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 SHOX2O60902 331 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 CBFA2T3O75081 653 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 SLC25A14O95258 325 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 TNFP01375 233 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 GIMD1P0DJR0 217 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 COL6A2P12110 1019 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 CTSEP14091 401 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 KELP23276 732 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 ADARP55265 1226 aaKnown RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 ITGA9Q13797 1035 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 CLEC14AQ86T13 490 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 TAX1BP1Q86VP1 789 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 LCA5Q86VQ0 697 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 NXPE1Q8N323 547 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 GDAP1Q8TB36 358 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 GLYATL1Q969I3 302 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 ULK4Q96C45 1275 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 OR2AG1Q9H205 316 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 C12orf65Q9H3J6 166 aaKnown RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-227ENST00000548080 SPASTQ9UBP0 616 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
HDAC7-227ENST00000548080 SIGLEC6O43699 453 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 OR1I1O60431 355 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 PYGLP06737 847 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 PKMP14618 531 aaKnown RBP17.09■□□□□ 0.33
HDAC7-227ENST00000548080 ZNF7P17097 686 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-227ENST00000548080 FDXRP22570 491 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 ACRV1P26436 265 aa17.09■□□□□ 0.33
HDAC7-227ENST00000548080 CDKN2DP55273 166 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms