RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 HPCAL1P37235 193 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PIGAP37287 484 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 NRIP1P48552 1158 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 TTPAP49638 278 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 CLCN4P51793 760 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 RAD23AP54725 363 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 IL2P60568 153 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ISL1P61371 349 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MTA1Q13330 715 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 KIAA0040Q15053 153 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PCBP2Q15366 365 aaKnown RBP eCLIP8.62□□□□□ -1.037e-11■■■■■ 50.5
TDP1-204ENST00000545686 TAF1AQ15573 450 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 MEP1AQ16819 746 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 DPY19L1Q2PZI1 675 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PLA2G4EQ3MJ16 856 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ZCCHC7Q8N3Z6 543 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 CDYL2Q8N8U2 506 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 GLB1L3Q8NCI6 653 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 DNAJB8Q8NHS0 232 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 SLC13A3Q8WWT9 602 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PPP3R2Q96LZ3 170 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ZBTB18Q99592 522 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MGME1Q9BQP7 344 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 ACTR8Q9H981 624 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 CD274Q9NZQ7 290 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 GALPQ9UBC7 116 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MTRRQ9UBK8 725 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 NUDT5Q9UKK9 219 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 TMED5Q9Y3A6 229 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 Q9Y3F1 56 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 ORC6Q9Y5N6 252 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 FRMPD3Q5JV73 1810 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ENPP3O14638 875 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MRPS14O60783 128 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 G6PDP11413 515 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PCNAP12004 261 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 AKT1P31749 480 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 HK3P52790 923 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ERVPABLB-1P60509 514 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 CYP4F3Q08477 520 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 TUSC3Q13454 348 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 PTPRNQ16849 979 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 IMPG1Q17R60 797 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 FAM110CQ1W6H9 321 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 AGAP7PQ5VUJ5 663 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 LAIR2Q6ISS4 152 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 FBXL22Q6P050 247 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 LETMD1Q6P1Q0 360 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 DEFB132Q7Z7B7 95 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 RBM23Q86U06 439 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 SETD9Q8NE22 299 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 OR7A2PQ8NGA2 310 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 CD200R1Q8TD46 325 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 KCNJ9Q92806 393 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 IGSF8Q969P0 613 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 LINGO1Q96FE5 620 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 FUBP3Q96I24 572 aaKnown RBP eCLIP8.62□□□□□ -1.03
TDP1-204ENST00000545686 DGCR6LQ9BY27 220 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ARMC7Q9H6L4 198 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 CARS2Q9HA77 564 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 SMURF2Q9HAU4 748 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 OLA1Q9NTK5 396 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ERVW-1Q9UQF0 538 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 FAM32AQ9Y421 112 aaKnown RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 TRIM17Q9Y577 477 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 MAGED1Q9Y5V3 778 aaPredicted RBP8.62□□□□□ -1.03
TDP1-204ENST00000545686 HSPE1-MOB4S4R3N1 261 aa8.62□□□□□ -1.03
TDP1-204ENST00000545686 ELOVL7A1L3X0 281 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 NCF1BA6NI72 391 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 NCF1CA8MVU1 366 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 GNGT2O14610 69 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 MUSKO15146 869 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 CHRNA1P02708 482 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 EIF2S1P05198 315 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 ZNF865P0CJ78 1059 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 NCF1P14598 390 aaPredicted RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 CXCR4P61073 352 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 NR6A1Q15406 480 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 DGUOKQ16854 277 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PAN2Q504Q3 1202 aaKnown RBP8.61□□□□□ -1.03
TDP1-204ENST00000545686 IL27RAQ6UWB1 636 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 SCIMPQ6UWF3 145 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 ENPP6Q6UWR7 440 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 GLT6D1Q7Z4J2 308 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 GPR149Q86SP6 731 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FAM86B1Q8N7N1 296 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 OR52B6Q8NGF0 335 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 FBXO30Q8TB52 745 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 METTL6Q8TCB7 284 aa8.61□□□□□ -1.03
TDP1-204ENST00000545686 PHF10Q8WUB8 498 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms