RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MTX2O75431 263 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 ENO2P09104 434 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 GLULP15104 373 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 INHBCP55103 352 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 TAS2R38P59533 333 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 SP140Q13342 867 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 PON2Q15165 354 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 BCL7AQ4VC05 210 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 CDKL4Q5MAI5 379 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 RASGEF1AQ8N9B8 481 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 UBTD2Q8WUN7 234 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 PRR11Q96HE9 360 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 MAELQ96JY0 434 aaKnown RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 CCDC106Q9BWC9 280 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 PHF7Q9BWX1 381 aaPredicted RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 SHCBP1LQ9BZQ2 653 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 TCF7L2Q9NQB0 619 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 ADAMTS6Q9UKP5 1117 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
GNE-206ENST00000543356 TNPO3Q9Y5L0 923 aaKnown RBP9.17□□□□□ -0.94
GNE-206ENST00000543356 LRRC14BA6NHZ5 514 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 SLC16A5O15375 505 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 FFAR2O15552 330 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 C8GP07360 202 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 FGF4P08620 206 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 T-ENOLP0DO92 83 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 GPR1P46091 355 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 MRPS21P82921 87 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 CLCQ05315 142 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 GRSF1Q12849 480 aaKnown RBP eCLIP9.16□□□□□ -0.94
GNE-206ENST00000543356 PCBP2Q15366 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
GNE-206ENST00000543356 RAET1GQ6H3X3 334 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 METTL2BQ6P1Q9 378 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 ADAMTSL4Q6UY14 1074 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ACAD11Q709F0 780 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 ASRGL1Q7L266 308 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 IL17RCQ8NAC3 791 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 AGAP11Q8TF27 550 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 PAPOLBQ9NRJ5 636 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 HEBP1Q9NRV9 189 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 TRIM33Q9UPN9 1127 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 COLQQ9Y215 455 aaPredicted RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 TRAF6Q9Y4K3 522 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 CFAP73A6NFT4 308 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 NCF1BA6NI72 391 aaPredicted RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 NCF1CA8MVU1 366 aaPredicted RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 TMEM233B4DJY2 109 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ADAM23O75077 832 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ATG13O75143 517 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 GPC4O75487 556 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 CDK14O94921 469 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 MLYCDO95822 493 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 GSTM1P09488 218 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 NCF1P14598 390 aaPredicted RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 VCLP18206 1134 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 AOC1P19801 751 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 CDKL1Q00532 357 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ROR2Q01974 943 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 GSTM4Q03013 218 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 TMEM115Q12893 351 aaPredicted RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 KANK2Q63ZY3 851 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 KIAA1211LQ6NV74 962 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 RASGRP3Q8IV61 690 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 PELI3Q8N2H9 469 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 HDDC3Q8N4P3 179 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ELMO1Q92556 727 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 GLMNQ92990 594 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ZNF570Q96NI8 536 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 NUF2Q9BZD4 464 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 MEAF6Q9HAF1 191 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 TNFRSF12AQ9NP84 129 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 ARL8BQ9NVJ2 186 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
GNE-206ENST00000543356 SCML1Q9UN30 329 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
GNE-206ENST00000543356 A0A1W2PP55 124 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 A0A1W2PQF6 199 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 K7ESM1 405 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 E2F3O00716 465 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 INPP4BO15327 924 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 TM7SF2O76062 418 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 SLCO2B1O94956 709 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CBX6O95503 412 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 KLF8O95600 359 aaPredicted RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 JUNP05412 331 aaKnown RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 HOXB2P14652 356 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 NAT1P18440 290 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CALB2P22676 271 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 TEAD1P28347 426 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 AGTR2P50052 363 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 RASSF2P50749 326 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CTSCP53634 463 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms