RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 IL31Q6EBC2 164 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 KIAA1841Q6NSI8 718 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 SLC22A15Q8IZD6 547 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 AGBL3Q8NEM8 1001 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 OR52K2Q8NGK3 314 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 PIK3R3Q92569 461 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 TTC9Q92623 222 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 C18orf25Q96B23 403 aaPredicted RBP9.59□□□□□ -0.87
TCF4-208ENST00000543082 CELF6Q96J87 481 aaKnown RBP9.59□□□□□ -0.87
TCF4-208ENST00000543082 GPR20Q99678 358 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 ZBTB20Q9HC78 741 aaPredicted RBP9.59□□□□□ -0.87
TCF4-208ENST00000543082 RGS18Q9NS28 235 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 ADGRE2Q9UHX3 823 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 PRELID1Q9Y255 219 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 PCDHGB6Q9Y5F9 930 aa9.59□□□□□ -0.87
TCF4-208ENST00000543082 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 I6L893 689 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 SLC7A4O43246 635 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 HBP1O60381 514 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ONECUT3O60422 494 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 PMPCBO75439 489 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PAPSS2O95340 614 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 GOT2P00505 430 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 TRAPPC2P0DI81 140 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 TRAPPC2BP0DI82 140 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 HOXD8P13378 290 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 FDXRP22570 491 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PPP3CCP48454 512 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 RACK1P63244 317 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 GALK2Q01415 458 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 YWHAHQ04917 246 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 KCTD2Q14681 263 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PLA2G4EQ3MJ16 856 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 SNAP47Q5SQN1 464 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ARHGAP36Q6ZRI8 547 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PIM3Q86V86 326 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 RYBPQ8N488 228 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 CHST13Q8NET6 341 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 KCTD13Q8WZ19 329 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 FAM162AQ96A26 154 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ZNF583Q96ND8 569 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 FDXACB1Q9BRP7 624 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 ZBED2Q9BTP6 218 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 CCDC32Q9BV29 185 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 REXO4Q9GZR2 422 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 NUAK2Q9H093 628 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 GABARAPL1Q9H0R8 117 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 AS3MTQ9HBK9 375 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 POPDC3Q9HBV1 291 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 DFFAO00273 331 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 WNT10BO00744 389 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 CAPN5O15484 640 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 UROSP10746 265 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 PRKACGP22612 351 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 EDNRBP24530 442 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 RRM2P31350 389 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ETV6P41212 452 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 CTSKP43235 329 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 OR4D1Q15615 310 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 DUSP7Q16829 419 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ANKS6Q68DC2 871 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 NEK5Q6P3R8 708 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 RANBP10Q6VN20 620 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 HFE2Q6ZVN8 426 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 SPATC1Q76KD6 591 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 TMEM179BQ7Z7N9 219 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 GATAD2AQ86YP4 633 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 SIX5Q8N196 739 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 ZNF548Q8NEK5 533 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 SETD6Q8TBK2 473 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PROKR1Q8TCW9 393 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 JPH3Q8WXH2 748 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 TMCO6Q96DC7 493 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 PABPC5Q96DU9 382 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 PGAP3Q96FM1 320 aaPredicted RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 PDLIM5Q96HC4 596 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 ST6GAL2Q96JF0 529 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 TNIP3Q96KP6 325 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ZNF599Q96NL3 588 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 ATOH8Q96SQ7 321 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 IRF2BPLQ9H1B7 796 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 MIR1-1HGQ9H1L0 117 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 RIBC2Q9H4K1 309 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 TFB2MQ9H5Q4 396 aaKnown RBP9.58□□□□□ -0.88
TCF4-208ENST00000543082 DDIT4Q9NX09 232 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 STMN3Q9NZ72 180 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 EHD3Q9NZN3 535 aa9.58□□□□□ -0.88
TCF4-208ENST00000543082 SUPT3HB4E1H0 165 aa9.57□□□□□ -0.88
TCF4-208ENST00000543082 C22orf31O95567 290 aa9.57□□□□□ -0.88
TCF4-208ENST00000543082 S1PR4O95977 384 aa9.57□□□□□ -0.88
TCF4-208ENST00000543082 F9P00740 461 aa9.57□□□□□ -0.88
TCF4-208ENST00000543082 FYNP06241 537 aa9.57□□□□□ -0.88
TCF4-208ENST00000543082 RPS17P08708 135 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms