RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ARNTP27540 789 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 CSTF2P33240 577 aaKnown RBP eCLIP13.96□□□□□ -0.17
LTBR-209ENST00000541102 SLC19A1P41440 591 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 UBE2IP63279 158 aaKnown RBP13.96□□□□□ -0.17
LTBR-209ENST00000541102 TRA2AQ13595 282 aaKnown RBP eCLIP13.96□□□□□ -0.17
LTBR-209ENST00000541102 MORF4L2Q15014 288 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 PCID2Q5JVF3 399 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 DNTTIP2Q5QJE6 756 aaKnown RBP13.96□□□□□ -0.17
LTBR-209ENST00000541102 ARHGAP40Q5TG30 622 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 GPR155Q7Z3F1 870 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 HOOK3Q86VS8 718 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 AMZ2Q86W34 360 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 ZFAND4Q86XD8 727 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 PIANPQ8IYJ0 282 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 AVL9Q8NBF6 648 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 STYXQ8WUJ0 223 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 HDAC10Q969S8 669 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 MFSD3Q96ES6 412 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 SGF29Q96ES7 293 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 KIFC1Q9BW19 673 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 XAB2Q9HCS7 855 aaKnown RBP13.96□□□□□ -0.17
LTBR-209ENST00000541102 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 BFARQ9NZS9 450 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 FOXJ2Q9P0K8 574 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 KLHL3Q9UH77 587 aa13.96□□□□□ -0.17
LTBR-209ENST00000541102 PRR19A6NJB7 356 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 OR52A4PA6NMU1 304 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 THRAP10827 490 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 FGF3P11487 239 aaPredicted RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 BRAFP15056 766 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 TYRP1P17643 537 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 PBLDP30039 288 aaPredicted RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 MC4RP32245 332 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 TMPRSS3P57727 454 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 PDE1BQ01064 536 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 ACVR1Q04771 509 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 DHX9Q08211 1270 aaKnown RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 CLN3Q13286 438 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 FASTKD3Q14CZ7 662 aaKnown RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 TGIF1Q15583 401 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 SOWAHCQ53LP3 525 aaPredicted RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 TMEM164Q5U3C3 297 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 ABRAXAS1Q6UWZ7 409 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 FAM83HQ6ZRV2 1179 aaPredicted RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 TMEM26Q6ZUK4 368 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 PCGF5Q86SE9 256 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 BEND7Q8N7W2 519 aaPredicted RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 CEP112Q8N8E3 955 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 AGBL5Q8NDL9 886 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
LTBR-209ENST00000541102 CXorf40BQ96DE9 158 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 SMOXQ9NWM0 555 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 OCIAD1Q9NX40 245 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 WHRNQ9P202 907 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 CRLS1Q9UJA2 301 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 PSMD13Q9UNM6 376 aa13.95□□□□□ -0.18
LTBR-209ENST00000541102 ZFHX4Q86UP3 3567 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 EFCAB7A8K855 629 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 C9orf172C9J069 976 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 H7C0S8 307 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 KCNJ13O60928 360 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 GOT2P00505 430 aaKnown RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 F7P08709 466 aaPredicted RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 AMD1P17707 334 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 FOXN2P32314 431 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 HALP42357 657 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 EPHA4P54764 986 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 UCNP55089 124 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 SARNPP82979 210 aaKnown RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 NFE2L1Q14494 772 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 SEMA3AQ14563 771 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 CLCA4Q14CN2 919 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 BBS9Q3SYG4 887 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 AGAP9Q5VTM2 703 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 CASC4Q6P4E1 433 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 UNC5BQ8IZJ1 945 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 SEC14L1Q92503 715 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 ART4Q93070 314 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 DCUN1D1Q96GG9 259 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 BBC3Q96PG8 261 aaPredicted RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 TAAR9Q96RI9 348 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 SLC39A1Q9NY26 324 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 MARCH4Q9P2E8 410 aaPredicted RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 WDR37Q9Y2I8 494 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 UTP11Q9Y3A2 253 aaKnown RBP13.94□□□□□ -0.18
LTBR-209ENST00000541102 SLC30A1Q9Y6M5 507 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 IGSF10Q6WRI0 2623 aa13.94□□□□□ -0.18
LTBR-209ENST00000541102 ZCWPW2A0A1B0GU75 182 aa13.93□□□□□ -0.18
LTBR-209ENST00000541102 LILRA5A6NI73 299 aa13.93□□□□□ -0.18
LTBR-209ENST00000541102 AGAP14A8MT82 685 aa13.93□□□□□ -0.18
LTBR-209ENST00000541102 GOLGA8KD6RF30 607 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms