RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ZNF148Q9UQR1 794 aa10.17□□□□□ -0.78
CDCA3-208ENST00000540683 MRFAP1Q9Y605 127 aa10.17□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF106Q9H2Y7 1883 aaKnown RBP10.17□□□□□ -0.78
CDCA3-208ENST00000540683 BAHCC1Q9P281 2608 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 COL6A6A6NMZ7 2263 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 OR52A4PA6NMU1 304 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 B8ZZF3 427 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 F5H423 210 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 LIN7AO14910 233 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ZBTB11O95625 1053 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 FTCDO95954 541 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 BRAFP15056 766 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TYRP1P17643 537 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 NELFEP18615 380 aaKnown RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 MSNP26038 577 aaKnown RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ACRV1P26436 265 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 PBLDP30039 288 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 MC4RP32245 332 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 HSD11B2P80365 405 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 SARNPP82979 210 aaKnown RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 KLF1Q13351 362 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ITIH4Q14624 930 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TGIF1Q15583 401 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ZRANB3Q5FWF4 1079 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 DNTTIP2Q5QJE6 756 aaKnown RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF648Q5T619 568 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF662Q6ZS27 426 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TAS2R42Q7RTR8 314 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 SPC24Q8NBT2 197 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ACVR1CQ8NER5 493 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TRIM58Q8NG06 486 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 SLC35B2Q8TB61 432 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 KLHL6Q8WZ60 621 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 C12orf66Q96MD2 445 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 BBC3Q96PG8 261 aaPredicted RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 HRASLS2Q9NWW9 162 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TMEM9Q9P0T7 183 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 PAK5Q9P286 719 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 POLG2Q9UHN1 485 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ANAPC5Q9UJX4 755 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 RIMKLBQ9ULI2 386 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 TFR2Q9UP52 801 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 REXO2Q9Y3B8 237 aaKnown RBP10.16□□□□□ -0.78
CDCA3-208ENST00000540683 KCTD3Q9Y597 815 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 ATMQ13315 3056 aa10.16□□□□□ -0.78
CDCA3-208ENST00000540683 OR5K3A6NET4 321 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 GOLGA6L3A6NEY3 463 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 C21orf140B9A014 251 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 CASC3O15234 703 aaKnown RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 CD63P08962 238 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 HBQ1P09105 142 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 OR56A5P0C7T3 313 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 FGF5P12034 268 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 CTSCP53634 463 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 NFE2L1Q14494 772 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 CLCA4Q14CN2 919 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 KHDC1Q4VXA5 237 aaKnown RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 KIAA1614Q5VZ46 1190 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 KCTD11Q693B1 232 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 VASH2Q86V25 355 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 TMEM139Q8IV31 216 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 CFAP206Q8IYR0 622 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF843Q8N446 348 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 GSDMBQ8TAX9 411 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 LCN9Q8WX39 176 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 OR6C1Q96RD1 312 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 RANBP9Q96S59 729 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 NAP1L3Q99457 506 aaPredicted RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 C17orf62Q9BQA9 187 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 APOL2Q9BQE5 337 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 TMEM121Q9BTD3 319 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 GPR87Q9BY21 358 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 SRMSQ9H3Y6 488 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 NPDC1Q9NQX5 325 aaPredicted RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 GEMIN8Q9NWZ8 242 aaKnown RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 SIDT1Q9NXL6 827 aaKnown RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 SCHIP1Q9P0W5 487 aaPredicted RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 SEMA5BQ9P283 1151 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 TRIM10Q9UDY6 481 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 TMPRSS11EQ9UL52 423 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 PADI1Q9ULC6 663 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 GUCA1BQ9UMX6 200 aa10.15□□□□□ -0.78
CDCA3-208ENST00000540683 PCYT1BQ9Y5K3 369 aaPredicted RBP10.15□□□□□ -0.78
CDCA3-208ENST00000540683 IGLV3-16A0A075B6K0 115 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 TRBV5-4A0A0C4DH59 114 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 AGRPO00253 132 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 KPNA5O15131 536 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DDX3YO15523 660 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 LDB2O43679 373 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 BUD23O43709 281 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SUN1O94901 812 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DLGAP3O95886 979 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 IFNB1P01574 187 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 KLK3P07288 261 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 LIFP15018 202 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 TCN2P20062 427 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 ADRA1DP25100 572 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 STAT5AP42229 794 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SEPHS1P49903 392 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms