RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 OR56B2PQ8NGI1 322 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 UBLCP1Q8WVY7 318 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ERLEC1Q96DZ1 483 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 PGM2Q96G03 612 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 FAM118BQ9BPY3 351 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 FAM126AQ9BYI3 521 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 MYLK2Q9H1R3 596 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 PPA2Q9H2U2 334 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 CCDC86Q9H6F5 360 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 NMUR1Q9HB89 426 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 GPAMQ9HCL2 828 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 MAT2BQ9NZL9 334 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 CACNG4Q9UBN1 327 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 TESMINQ9Y4I5 508 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 HEMK1Q9Y5R4 338 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 GPR171O14626 319 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SMAD6O43541 496 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 HTR3BO95264 441 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 GNSP15586 552 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 TGM1P22735 817 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 KELP23276 732 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 WARSP23381 471 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 BMXP51813 675 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SLC7A2P52569 658 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 CASP9P55211 416 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 KCNC3Q14003 757 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 UAP1Q16222 522 aaPredicted RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 CDO1Q16878 200 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 C12orf40Q86WS4 652 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ZNF227Q86WZ6 799 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 CADM2Q8N3J6 435 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ARL14Q8N4G2 192 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 FBXO25Q8TCJ0 367 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 RXFP2Q8WXD0 754 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 PTP4A1Q93096 173 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 MSLNLQ96KJ4 702 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 KIFC1Q9BW19 673 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 Q9H521 79 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 HAO1Q9UJM8 370 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 SLC6A14Q9UN76 642 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
DDX55-206ENST00000539934 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
DDX55-206ENST00000539934 hCG_1818297A0A087WSY0 165 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 C2CD4BA6NLJ0 364 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ZNF487B1APH4 448 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 GLP2RO95838 553 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 PDGFAP04085 211 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 IL1R2P27930 398 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 MIPP30301 263 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 DNAJA1P31689 397 aaKnown RBP12.42□□□□□ -0.42
DDX55-206ENST00000539934 CLCNKBP51801 687 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SLC26A5P58743 744 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX55-206ENST00000539934 SLC6A3Q01959 620 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ZMAT1Q5H9K5 638 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 MPP7Q5T2T1 576 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SYDE1Q6ZW31 735 aaPredicted RBP12.42□□□□□ -0.42
DDX55-206ENST00000539934 TMC3Q7Z5M5 1100 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 GPR180Q86V85 440 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 FJX1Q86VR8 437 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 TDRPQ86YL5 185 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 B3GALNT2Q8NCR0 500 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 UFD1Q92890 307 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 RNF34Q969K3 372 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 QRSL1Q9H0R6 528 aaKnown RBP12.42□□□□□ -0.42
DDX55-206ENST00000539934 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CAPN10Q9HC96 672 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CPNE5Q9HCH3 593 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ZDHHC18Q9NUE0 388 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CMTM6Q9NX76 183 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 GRHL1Q9NZI5 618 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 PMF1-BGLAPU3KQ54 211 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 EPG5Q9HCE0 2579 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 ZNF292O60281 2723 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 E2F8A0AVK6 867 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 PQLC2LA1A4F0 135 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 SERTM1A2A2V5 107 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 TERTO14746 1132 aaKnown RBP12.42□□□□□ -0.42
DDX55-206ENST00000539934 QDPRP09417 244 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CHMP24386 653 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 PTPN7P35236 360 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CDKN2BP42772 138 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
DDX55-206ENST00000539934 MGAT5Q09328 741 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 TEAD4Q15561 434 aa12.42□□□□□ -0.42
DDX55-206ENST00000539934 STXBP5Q5T5C0 1151 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms