RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GRIN2CQ14957 1233 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 LSM12Q3MHD2 195 aaKnown RBP16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 ISLR2Q6UXK2 745 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 TRIM67Q6ZTA4 783 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 RBFAQ8N0V3 343 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 KDM1BQ8NB78 822 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 RP9Q8TA86 221 aaKnown RBP16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 SCAMP4Q969E2 229 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 MSLNLQ96KJ4 702 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 FAM129BQ96TA1 746 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 RAP2CQ9Y3L5 183 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 AP4B1Q9Y6B7 739 aa16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 MUC22E2RYF6 1773 aaPredicted RBP16.83■□□□□ 0.28
PCDHB17P-201ENST00000539533 ARNTLO00327 626 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 COQ9O75208 318 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 TSPAN12O95859 305 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CD9P21926 228 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 EPHA3P29320 983 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 ETV3P41162 512 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 RALGDSQ12967 914 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CYLC2Q14093 348 aaPredicted RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 SEL1L3Q68CR1 1132 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 PTRHD1Q6GMV3 140 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 Q6ZVL8 140 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 RPS27LQ71UM5 84 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 TICAM1Q8IUC6 712 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CPNE9Q8IYJ1 553 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 LSMEM2Q8N112 164 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CATSPER1Q8NEC5 780 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 LKAAEAR1Q8TD35 194 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 RCN3Q96D15 328 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 DERL2Q9GZP9 239 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 TTYH1Q9H313 450 aaPredicted RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 PCDHB1Q9Y5F3 818 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 COMMD10Q9Y6G5 202 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CDC7O00311 574 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 PLK4O00444 970 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 ECI2O75521 394 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRNPP04156 253 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZNF30P17039 623 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 MSX2P35548 267 aaPredicted RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 MTHFRP42898 656 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 MAGEA8P43361 318 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 DNAJB13P59910 316 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 ITPRIPL2Q3MIP1 535 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CPSF7Q8N684 471 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 METTL25Q8N6Q8 603 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 ADCY4Q8NFM4 1077 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 OR8D1Q8WZ84 308 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CNBD2Q96M20 576 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 MRPS26Q9BYN8 205 aaKnown RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 COPS7BQ9H9Q2 264 aaPredicted RBP16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 PKD2L2Q9NZM6 624 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 NCKIPSDQ9NZQ3 722 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 BCAP29Q9UHQ4 241 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 TMPRSS11EQ9UL52 423 aa16.82■□□□□ 0.28
PCDHB17P-201ENST00000539533 SLC22A2O15244 555 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 RPS3P23396 243 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 RPL14P50914 215 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 PKNOX1P55347 436 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 HPCAP84074 193 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 CEACAM7Q14002 265 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 NADK2Q4G0N4 442 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 TMEM259Q4ZIN3 620 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 LYPLAL1Q5VWZ2 237 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 EGFLAMQ63HQ2 1017 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 NKAPQ8N5F7 415 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 HCAR2Q8TDS4 363 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ARRDC3Q96B67 414 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ATOH8Q96SQ7 321 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 PRO3102Q9H379 93 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 TFB2MQ9H5Q4 396 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZNF696Q9H7X3 374 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 THAP10Q9P2Z0 257 aaPredicted RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 CCDC160A6NGH7 325 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 UBXN8O00124 270 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 CFLARO15519 480 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 TNFAIP8O95379 198 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 MTHFD2P13995 350 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 IL2P60568 153 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 MYBPC1Q00872 1141 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 MS4A2Q01362 244 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ELAVL3Q14576 367 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 TSNQ15631 228 aaKnown RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 B3GNT6Q6ZMB0 384 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 DPPA4Q7L190 304 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 PGAM4Q8N0Y7 254 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 BHLHE22Q8NFJ8 381 aaPredicted RBP16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 RHEBL1Q8TAI7 183 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 SUSD6Q92537 303 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 KIAA1191Q96A73 305 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 LINGO1Q96FE5 620 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 NUF2Q9BZD4 464 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 FAM83DQ9H4H8 585 aa16.81■□□□□ 0.28
PCDHB17P-201ENST00000539533 ZNF385DQ9H6B1 395 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms