RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ART4Q93070 314 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 ZNF514Q96K75 400 aaPredicted RBP16.03■□□□□ 0.16
ATL3-202ENST00000535789 RANBP9Q96S59 729 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 COPS8Q99627 209 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 DPYSL5Q9BPU6 564 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 DPH1Q9BZG8 443 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 APMAPQ9HDC9 416 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 RNF14Q9UBS8 474 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 TCAF1Q9Y4C2 921 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
ATL3-202ENST00000535789 KIF1CO43896 1103 aaKnown RBP16.02■□□□□ 0.16
ATL3-202ENST00000535789 LIPCP11150 499 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 CRADDP78560 199 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 CACNG1Q06432 222 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 TSTD2Q5T7W7 516 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 ANKS6Q68DC2 871 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 CAPRIN2Q6IMN6 1127 aaKnown RBP16.02■□□□□ 0.16
ATL3-202ENST00000535789 PPP1R21Q6ZMI0 780 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 DNAAF3Q8N9W5 541 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 AGBL5Q8NDL9 886 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 HM13Q8TCT9 377 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 LRRC45Q96CN5 670 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 C9orf72Q96LT7 481 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 EPB41L1Q9H4G0 881 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 COG4Q9H9E3 785 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 EIF2B3Q9NR50 452 aaKnown RBP16.02■□□□□ 0.16
ATL3-202ENST00000535789 PCDHGA3Q9Y5H0 932 aa16.02■□□□□ 0.16
ATL3-202ENST00000535789 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 CAPN5O15484 640 aaPredicted RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 GOT2P00505 430 aaKnown RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 ANKRD34CP0C6C1 535 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 CSTF2P33240 577 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATL3-202ENST00000535789 HALP42357 657 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 PPM1FP49593 454 aaPredicted RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 TMPRSS3P57727 454 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 VASH2Q86V25 355 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 FAM129CQ86XR2 697 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 HDAC10Q969S8 669 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 C12orf66Q96MD2 445 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 TGM7Q96PF1 710 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 TAAR9Q96RI9 348 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 CTRCQ99895 268 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 OR52A5Q9H2C5 316 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 IMP3Q9NV31 184 aaKnown RBP16.01■□□□□ 0.15
ATL3-202ENST00000535789 PIEZO2Q9H5I5 2752 aa16.01■□□□□ 0.15
ATL3-202ENST00000535789 HEATR9A2RTY3 570 aa16■□□□□ 0.15
ATL3-202ENST00000535789 B4E171 279 aa16■□□□□ 0.15
ATL3-202ENST00000535789 E7EVH7 732 aa16■□□□□ 0.15
ATL3-202ENST00000535789 OR1I1O60431 355 aa16■□□□□ 0.15
ATL3-202ENST00000535789 POLBP06746 335 aa16■□□□□ 0.15
ATL3-202ENST00000535789 PDHA2P29803 388 aa16■□□□□ 0.15
ATL3-202ENST00000535789 TSPAN7P41732 249 aa16■□□□□ 0.15
ATL3-202ENST00000535789 PREPP48147 710 aa16■□□□□ 0.15
ATL3-202ENST00000535789 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
ATL3-202ENST00000535789 CKAP4Q07065 602 aaKnown RBP16■□□□□ 0.15
ATL3-202ENST00000535789 KCNJ11Q14654 390 aa16■□□□□ 0.15
ATL3-202ENST00000535789 TRIP13Q15645 432 aaPredicted RBP16■□□□□ 0.15
ATL3-202ENST00000535789 ARHGAP40Q5TG30 622 aa16■□□□□ 0.15
ATL3-202ENST00000535789 ANKRD22Q5VYY1 191 aa16■□□□□ 0.15
ATL3-202ENST00000535789 PACS1Q6VY07 963 aa16■□□□□ 0.15
ATL3-202ENST00000535789 TAS2R42Q7RTR8 314 aa16■□□□□ 0.15
ATL3-202ENST00000535789 RBM12BQ8IXT5 1001 aaKnown RBP16■□□□□ 0.15
ATL3-202ENST00000535789 CFAP206Q8IYR0 622 aa16■□□□□ 0.15
ATL3-202ENST00000535789 LKAAEAR1Q8TD35 194 aa16■□□□□ 0.15
ATL3-202ENST00000535789 RNF31Q96EP0 1072 aa16■□□□□ 0.15
ATL3-202ENST00000535789 DCUN1D1Q96GG9 259 aa16■□□□□ 0.15
ATL3-202ENST00000535789 NAP1L3Q99457 506 aaPredicted RBP16■□□□□ 0.15
ATL3-202ENST00000535789 DDA1Q9BW61 102 aa16■□□□□ 0.15
ATL3-202ENST00000535789 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
ATL3-202ENST00000535789 SPRY4Q9C004 299 aa16■□□□□ 0.15
ATL3-202ENST00000535789 B3GNT4Q9C0J1 378 aa16■□□□□ 0.15
ATL3-202ENST00000535789 TREX1Q9NSU2 369 aa16■□□□□ 0.15
ATL3-202ENST00000535789 MARCH4Q9P2E8 410 aaPredicted RBP16■□□□□ 0.15
ATL3-202ENST00000535789 RIMKLBQ9ULI2 386 aa16■□□□□ 0.15
ATL3-202ENST00000535789 NEU2Q9Y3R4 380 aa16■□□□□ 0.15
ATL3-202ENST00000535789 K7ENP7 123 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 TMEM63AO94886 807 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 RALBP11234 206 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 ADRA1DP25100 572 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 ARNTP27540 789 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 PAFAH1B1P43034 410 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 LMAN1P49257 510 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 SH3BP2P78314 561 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 MC2RQ01718 297 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 INO80CQ6PI98 192 aaPredicted RBP15.99■□□□□ 0.15
ATL3-202ENST00000535789 NAPRTQ6XQN6 538 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 FAM92BQ6ZTR7 304 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 GPR155Q7Z3F1 870 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 PRSS42Q7Z5A4 293 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 PLXDC1Q8IUK5 500 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 MAIP1Q8WWC4 291 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 TRIM56Q9BRZ2 755 aaKnown RBP15.99■□□□□ 0.15
ATL3-202ENST00000535789 ZNF768Q9H5H4 540 aaKnown RBP15.99■□□□□ 0.15
ATL3-202ENST00000535789 CHRAC1Q9NRG0 131 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 SYBUQ9NX95 663 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 SLC39A1Q9NY26 324 aa15.99■□□□□ 0.15
ATL3-202ENST00000535789 SLC24A2Q9UI40 661 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms