RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 METRNLQ641Q3 311 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 NAGSQ8N159 534 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 LILRA3Q8N6C8 439 aaPredicted RBP12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 GPR156Q8NFN8 814 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 RHBDD1Q8TEB9 315 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 SETD7Q8WTS6 366 aaKnown RBP12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 DNAJC16Q9Y2G8 782 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 CRYL1Q9Y2S2 319 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 PSAT1Q9Y617 370 aa12.49□□□□□ -0.41
RPUSD4-208ENST00000533628 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 PIKFYVEQ9Y2I7 2098 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 RASSF9O75901 435 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 PIAS1O75925 651 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 GSTM1P09488 218 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 OR56A5P0C7T3 313 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 BRAFP15056 766 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 MCM3P25205 808 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 FMO4P31512 558 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 GSTM4Q03013 218 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 ABRAXAS1Q6UWZ7 409 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 HM13Q8TCT9 377 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 WASH6PQ9NQA3 447 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 PRDM8Q9NQV8 689 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 SCHIP1Q9P0W5 487 aaPredicted RBP12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 VPS9D1Q9Y2B5 631 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 PCDHB1Q9Y5F3 818 aa12.48□□□□□ -0.41
RPUSD4-208ENST00000533628 ARHGEF17Q96PE2 2063 aaPredicted RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 UBA6A0AVT1 1052 aaPredicted RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 SPAG6O75602 509 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 ESR1P03372 595 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 ALPPL2P10696 532 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 MYF5P13349 255 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PKMP14618 531 aaKnown RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CCR7P32248 378 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CLNS1AP54105 237 aaKnown RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 INAVAQ3KP66 663 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 FBF1Q8TES7 1133 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 COG4Q9H9E3 785 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 LATS2Q9NRM7 1088 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 DLL3Q9NYJ7 618 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 GNPTGQ9UJJ9 305 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 DOLKQ9UPQ8 538 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 SLC5A10A0PJK1 596 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 PFDN6O15212 129 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 FTH1P02794 183 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 VCLP18206 1134 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 TIAL1Q01085 375 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 SLMAPQ14BN4 828 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CEP85LQ5SZL2 805 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 GLRX5Q86SX6 157 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CFAP206Q8IYR0 622 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 KYQ8NBH2 561 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 DEFB124Q8NES8 71 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 ZDHHC1Q8WTX9 485 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 EPB41L4BQ9H329 900 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 DPEP2Q9H4A9 486 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 GALPQ9UBC7 116 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 RABGEF1Q9UJ41 708 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
RPUSD4-208ENST00000533628 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 GPC4O75487 556 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 CKMT1AP12532 417 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 F3P13726 295 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 ITGB6P18564 788 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 IDSP22304 550 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 AOAHP28039 575 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 KBTBD12Q3ZCT8 623 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 CAPRIN2Q6IMN6 1127 aaKnown RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 NAPRTQ6XQN6 538 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 SFRP1Q8N474 314 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 ARL10Q8N8L6 244 aa12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 CNDP2Q96KP4 475 aaKnown RBP12.46□□□□□ -0.41
RPUSD4-208ENST00000533628 RTKNQ9BST9 563 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms