RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PCLAFQ15004 111 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TGIF1Q15583 401 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 FASTKD1Q53R41 847 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ACSBG2Q5FVE4 666 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TEDDM1Q5T9Z0 273 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TIFABQ6ZNK6 161 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PID1Q7Z2X4 250 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 B3GNT8Q7Z7M8 397 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SDR16C5Q8N3Y7 309 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 OR7D4Q8NG98 312 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 OR6C4Q8NGE1 309 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SCG3Q8WXD2 468 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TMEM159Q96B96 161 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MTBPQ96DY7 904 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MFSD3Q96ES6 412 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 NSL1Q96IY1 281 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 C1orf74Q96LT6 269 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 NUDCD1Q96RS6 583 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MLPHQ9BV36 600 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 C1QTNF7Q9BXJ2 289 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TKTL2Q9H0I9 626 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ACSS2Q9NR19 701 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 WDR70Q9NW82 654 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TMEM216Q9P0N5 145 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 RCOR3Q9P2K3 495 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SEPT3Q9UH03 358 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 IGLV3-10A0A075B6K4 115 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 GOLGA8TH3BQL2 631 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PLIN3O60664 434 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ENO1P06733 434 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ALPIP09923 528 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 JMJD7P0C870 316 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 MLNP12872 115 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CD1EP15812 388 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CALB2P22676 271 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ELOCQ15369 112 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ZNF805Q5CZA5 627 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CERCAMQ5T4B2 595 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 LGSNQ5TDP6 509 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 C4orf22Q6V702 233 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ARHGAP36Q6ZRI8 547 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 KYQ8NBH2 561 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ISG20Q96AZ6 181 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CELF6Q96J87 481 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CLPTM1LQ96KA5 538 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 SORT1Q99523 831 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 SPON2Q9BUD6 331 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ADNPQ9H2P0 1102 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 LRRN3Q9H3W5 708 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ZDHHC6Q9H6R6 413 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 WDCPQ9H6R7 721 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CAB39LQ9H9S4 337 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ATP13A1Q9HD20 1204 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 EIF2B3Q9NR50 452 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PPARGC1AQ9UBK2 798 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 GULP1Q9UBP9 304 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PISDQ9UG56 409 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PNMA8BQ9ULN7 279 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 DOLKQ9UPQ8 538 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 LOXL2Q9Y4K0 774 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PCDHGA4Q9Y5G9 962 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 RPS6KL1Q9Y6S9 549 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 HECTD1Q9ULT8 2610 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ANKRD36A6QL64 1941 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ZCWPW2A0A1B0GU75 182 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 C16orf96A6NNT2 1141 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 NEMP1O14524 444 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 GYG2O15488 501 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CCDC22O60826 627 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 KRT36O76013 467 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 F9P00740 461 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 RPLP0P05388 317 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 TPH1P17752 444 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PGAM1P18669 254 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CD82P27701 267 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 OR1E1P30953 314 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 BLKP51451 505 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ALDH18A1P54886 795 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ARF5P84085 180 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 IRF9Q00978 393 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PDK1Q15118 436 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ARTNQ5T4W7 220 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 VWA5B1Q5TIE3 1220 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CYS1Q717R9 158 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 TFAP2DQ7Z6R9 452 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PSTKQ8IV42 348 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 C10orf107Q8IVU9 208 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ENDOVQ8N8Q3 282 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 RBM15BQ8NDT2 890 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 NRG4Q8WWG1 115 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 PGAP3Q96FM1 320 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CERS2Q96G23 380 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 B3GNT4Q9C0J1 378 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 CXorf56Q9H5V9 222 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms