RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 TRIM45Q9H8W5 580 aaPredicted RBP6.77□□□□□ -1.33
BDNF-217ENST00000533131 CNGB3Q9NQW8 809 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 NUDT15Q9NV35 164 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 RDH8Q9NYR8 311 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 GTSE1Q9NYZ3 720 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.77□□□□□ -1.33
BDNF-217ENST00000533131 USP21Q9UK80 565 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 FZD10Q9ULW2 581 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 PCNTO95613 3336 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 SYNGAP1Q96PV0 1343 aa6.77□□□□□ -1.33
BDNF-217ENST00000533131 C1orf232A0A0U1RR37 186 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TUBAL3A6NHL2 446 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 DYNC1LI2O43237 492 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 IFNA14P01570 189 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CYP1A1P04798 512 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 PTPN6P29350 595 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 RRM2P31350 389 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 AKT2P31751 481 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 HNRNPH3P31942 346 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 POLE2P56282 527 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 YWHAGP61981 247 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-217ENST00000533131 CYP27C1Q4G0S4 372 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TMEM119Q4V9L6 283 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 LRRC38Q5VT99 294 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CBWD2Q8IUF1 395 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ARHGEF19Q8IW93 802 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 OR10H5Q8NGA6 315 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ACTRT1Q8TDG2 376 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 GTPBP2Q9BX10 602 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 NUF2Q9BZD4 464 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 MS4A7Q9GZW8 240 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 CDC42EP4Q9H3Q1 356 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 C10orf88Q9H8K7 445 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 PCDH9Q9HC56 1237 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TM7SF3Q9NS93 570 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 MYH6P13533 1939 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 A0A0B4J293 547 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 AGAP5A6NIR3 686 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ISM1B1AKI9 464 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 E9PI62 339 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CXCL11O14625 94 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 PPIP5K2O43314 1243 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 RGS10O43665 173 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 SMIM24O75264 130 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 EBLN1P0CF75 366 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 PCSK1P29120 753 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ARFIP2P53365 341 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 SLC6A3Q01959 620 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 EPHA7Q15375 998 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 AMZ1Q400G9 498 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 PLA1AQ53H76 456 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 RTP2Q5QGT7 225 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 DCAF12L1Q5VU92 463 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 KCTD11Q693B1 232 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 HAUS6Q7Z4H7 955 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 USP37Q86T82 979 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ZNF598Q86UK7 904 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 LRRC6Q86X45 466 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CCNYL1Q8N7R7 359 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TTLQ8NG68 377 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 RNASE8Q8TDE3 154 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 ATP8B4Q8TF62 1192 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CORO2AQ92828 525 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 SLC47A1Q96FL8 570 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ACCSQ96QU6 501 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 KCNK16Q96T55 309 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 MTG1Q9BT17 334 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 PLK3Q9H4B4 646 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 UXTQ9UBK9 157 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 NXF1Q9UBU9 619 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 POLRMTO00411 1230 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 NDUFS3O75489 264 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TMEM63AO94886 807 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 DLGAP3O95886 979 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 GH1P01241 217 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ITIH2P19823 946 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ACOT2P49753 483 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 POLR2GP62487 172 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-217ENST00000533131 CTBP1Q13363 440 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ALCAMQ13740 583 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 AANATQ16613 207 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TYSND1Q2T9J0 566 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 VARS2Q5ST30 1063 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 ZNF425Q6IV72 752 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 GDF6Q6KF10 455 aaPredicted RBP6.76□□□□□ -1.33
BDNF-217ENST00000533131 CRTC3Q6UUV7 619 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 MAMDC4Q6UXC1 1216 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 VTCN1Q7Z7D3 282 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 KATNAL2Q8IYT4 538 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ZBED8Q8IZ13 594 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 TMEM116Q8NCL8 245 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 WNT8BQ93098 351 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 ST6GALNAC6Q969X2 333 aa6.76□□□□□ -1.33
BDNF-217ENST00000533131 CHST8Q9H2A9 424 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms