RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 TMEM164Q5U3C3 297 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 KLHDC10Q6PID8 442 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 HTR3DQ70Z44 454 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 SRFBP1Q8NEF9 429 aaKnown RBP15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 TRMOQ9BU70 441 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 KRCC1Q9NPI7 259 aaPredicted RBP15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 PACSIN3Q9UKS6 424 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 C6P13671 934 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 PFKLP17858 780 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 R3HCC1LQ7Z5L2 792 aaKnown RBP15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 PROX1Q92786 737 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 TSACCQ96A04 125 aaPredicted RBP15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 OR52E6Q96RD3 313 aa15.48■□□□□ 0.07
PPFIA1-222ENST00000532504 AHSGP02765 367 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 PROCP04070 461 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CAPN1P07384 714 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 JUNDP17535 347 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 NDUFS1P28331 727 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 COPZ1P61923 177 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 SLC7A9P82251 487 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ZDHHC24Q6UX98 284 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CATSPER1Q8NEC5 780 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 TAC3Q9UHF0 121 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ZNF180Q9UJW8 692 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 OR1A2Q9Y585 309 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CLDN4O14493 209 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 GJA4P35212 333 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 RPL3P39023 403 aaKnown RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 MLLT3P42568 568 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 C2orf80Q0P641 193 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ARL13AQ5H913 290 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CYP2U1Q7Z449 544 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 MRGPRX2Q96LB1 330 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 WDR92Q96MX6 357 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CEP44Q9C0F1 390 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 URB1O60287 2271 aaKnown RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 DNAJC8O75937 253 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ANXA4P09525 319 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CSTF1Q05048 431 aaKnown RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 TRIM71Q2Q1W2 868 aaKnown RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 TIGD2Q4W5G0 525 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 SLC44A4Q53GD3 710 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 KRT73Q86Y46 540 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CDK20Q8IZL9 346 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 NXPE1Q8N323 547 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ATG16L2Q8NAA4 619 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 VPS33AQ96AX1 596 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 LENG8Q96PV6 779 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 EBPLQ9BY08 206 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 MYLK2Q9H1R3 596 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 DOCK2Q92608 1830 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 CHRM1P11229 460 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 GCKP35557 465 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 MAPK12P53778 367 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 NIPAL4Q0D2K0 466 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 BHLHB9Q6PI77 547 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 FBXO15Q8NCQ5 510 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 RAB11FIP5Q9BXF6 653 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 RAD21L1Q9H4I0 556 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 ADPRHL2Q9NX46 363 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 OR1I1O60431 355 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 EPOP01588 193 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 BUD31P41223 144 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 LCP2Q13094 533 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 TSPAN33Q86UF1 283 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 P3H2Q8IVL5 708 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 PCBD2Q9H0N5 130 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 TMEM245Q9H330 911 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 UBE2ZQ9H832 354 aaPredicted RBP15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 SUSD2Q9UGT4 822 aa15.47■□□□□ 0.07
PPFIA1-222ENST00000532504 A0A0U1RQS6 177 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 RFXANKO14593 260 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 MAP2K7O14733 419 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ZNF217O75362 1048 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ELOCQ15369 112 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 CPTPQ5TA50 214 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ZYG11AQ6WRX3 759 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 RTL10Q7L3V2 364 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 VN1R2Q8NFZ6 395 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 EEF1AKMT1Q8WVE0 214 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 TWIST2Q8WVJ9 160 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 JPH3Q8WXH2 748 aaPredicted RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SLC22A18Q96BI1 424 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 PPM1HQ9ULR3 514 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SUFUQ9UMX1 484 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 CITO14578 2027 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ECM29Q5VYK3 1845 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 TRAFD1O14545 582 aaPredicted RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ADRB3P13945 408 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 LAPTM5Q13571 262 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 COL9A2Q14055 689 aaPredicted RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 UBAP2LQ14157 1087 aaKnown RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 RSPO2Q6UXX9 243 aaPredicted RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 IQCKQ8N0W5 287 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 RNF31Q96EP0 1072 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 DACH2Q96NX9 599 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 OR2M4Q96R27 311 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SMAD5Q99717 465 aaKnown RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 NUSAP1Q9BXS6 441 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms