RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 IRF9Q00978 393 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 PPARDQ03181 441 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 CDK18Q07002 472 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 EIF2B5Q13144 721 aaKnown RBP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 GALNT3Q14435 633 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLBPQ14493 270 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 SPARCL1Q14515 664 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 PRPSAP1Q14558 356 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 NFATC4Q14934 902 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 NKG7Q16617 165 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 UGT8Q16880 541 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 HS1BP3Q53T59 392 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 TPRG1LQ5T0D9 272 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 N4BP2L1Q5TBK1 243 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FAXCQ5TGI0 409 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 MBNL2Q5VZF2 373 aaKnown RBP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 ESRP1Q6NXG1 681 aaKnown RBP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 PNCKQ6P2M8 343 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 ENPP7Q6UWV6 458 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 MACC1Q6ZN28 852 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 Q6ZVL8 140 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC25A45Q8N413 288 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 EID2Q8N6I1 236 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 PLA2G15Q8NCC3 412 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRIM58Q8NG06 486 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 CCHCR1Q8TD31 782 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 ADAMTS18Q8TE60 1221 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 TADA1Q96BN2 335 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 DTD2Q96FN9 168 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 SMIM14Q96QK8 99 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FCRL5Q96RD9 977 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRIB3Q96RU7 358 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 LYSMD1Q96S90 227 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 MDFIQ99750 246 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 CENPOQ9BU64 300 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 APOOQ9BUR5 198 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 MLPHQ9BV36 600 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FSD1LQ9BXM9 530 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 WDR26Q9H7D7 661 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 IPPKQ9H8X2 491 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FTSJ1Q9UET6 329 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FAM153AQ9UHL3 310 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 NUP205Q92621 2012 aa5.74□□□□□ -1.49
HMGB1P42-201ENST00000532126 FRYLO94915 3013 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRBV23OR9-2A0A075B6M9 112 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LOC285095A0A1B0GVY8 99 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TCRBV7S2A1N4TA0A589 114 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SYNDIG1LA6NDD5 238 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TMEM202A6NGA9 273 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 K7ESM1 405 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRIM38O00635 465 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TNFSF14O43557 240 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CLDN7O95471 211 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LDOC1O95751 146 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 EPOP01588 193 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC4A1P02730 911 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CTSBP07858 339 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 HOXC4P09017 264 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 C1SP09871 688 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PIRTP0C851 137 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ALPPL2P10696 532 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GM2AP17900 193 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TEAD1P28347 426 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GRK3P35626 688 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRIM23P36406 574 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GPR1P46091 355 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 MAP2K3P46734 347 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 HSPA7P48741 367 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 BLKP51451 505 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 STC1P52823 247 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GEMP55040 296 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 WNT3AP56704 352 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 KIAA1024LP59773 190 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SRP54P61011 504 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 DPTQ07507 201 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CYP4F3Q08477 520 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 MPP3Q13368 585 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CDKN3Q16667 212 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ALG11Q2TAA5 492 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CCDC157Q569K6 752 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ANKRD20A2Q5SQ80 823 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ANKRD20A1Q5TYW2 823 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ANKRD20A3Q5VUR7 823 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RAET1GQ6H3X3 334 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 HIBCHQ6NVY1 386 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 KDELC1Q6UW63 502 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ARHGEF18Q6ZSZ5 1173 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RFLNAQ6ZTI6 216 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ZNF765Q7L2R6 523 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 KANSL1Q7Z3B3 1105 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RD3Q7Z3Z2 195 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TECPR1Q7Z6L1 1165 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GLRX5Q86SX6 157 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LRRTM4Q86VH4 590 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 HEATR4Q86WZ0 1026 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC13A5Q86YT5 568 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 NRSN1Q8IZ57 195 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RBFAQ8N0V3 343 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 FAM71DQ8N9W8 422 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms