RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ATP6V0BQ99437 205 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 PARK7Q99497 189 aaKnown RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 GFI1Q99684 422 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 OLFM1Q99784 485 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 FZD8Q9H461 694 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 SEBOXQ9HB31 216 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 PA2G4Q9UQ80 394 aaKnown RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 TMEM184BQ9Y519 407 aaPredicted RBP4.31□□□□□ -1.72
USP47-211ENST00000531513 RAI2Q9Y5P3 530 aa4.31□□□□□ -1.72
USP47-211ENST00000531513 OOEPA6NGQ2 149 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 SPINT2O43291 252 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 ZNF217O75362 1048 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 PNPP00491 289 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 IFNA2P01563 188 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 KLKB1P03952 638 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 PTMAP06454 111 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 DANCRP0C864 163 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 HRH2P25021 359 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 GABRA5P31644 462 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 HNRNPH1P31943 449 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 ARRB2P32121 409 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 P2RX3P56373 397 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 HNRNPKP61978 463 aaKnown RBP eCLIP4.3□□□□□ -1.72
USP47-211ENST00000531513 RCN2Q14257 317 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 DECR1Q16698 335 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 DNTTIP2Q5QJE6 756 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 RNASEH2BQ5TBB1 312 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 ZDHHC20Q5W0Z9 365 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 DUS1LQ6P1R4 473 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 CNSTQ6PJW8 725 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 FIGLAQ6QHK4 219 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 C15orf39Q6ZRI6 1047 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 SHFQ7M4L6 423 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 KLHL7Q8IXQ5 586 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 CNPY4Q8N129 248 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 TMEM199Q8N511 208 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 SLC38A9Q8NBW4 561 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 OCC1Q8TAD7 63 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 C9orf43Q8TAL5 461 aaPredicted RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 BBS10Q8TAM1 723 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 TBC1D16Q8TBP0 767 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 ATP6V0A1Q93050 837 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 MIB2Q96AX9 1013 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 ERLEC1Q96DZ1 483 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 PDLIM5Q96HC4 596 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 MEIS3Q99687 375 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 HAUS8Q9BT25 410 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 UTP14AQ9BVJ6 771 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 MOV10L1Q9BXT6 1211 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 POLDIP3Q9BY77 421 aaKnown RBP4.3□□□□□ -1.72
USP47-211ENST00000531513 WNT5BQ9H1J7 359 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 TMEM51Q9NW97 253 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 OR6C3Q9NZP0 311 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 SEPT10Q9P0V9 454 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 MOSPD1Q9UJG1 213 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 SNX7Q9UNH6 387 aa4.3□□□□□ -1.72
USP47-211ENST00000531513 A0A1W2PRV1 198 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 IFITM10A6NMD0 228 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 J3QR06 171 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 PTGESO14684 152 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 SLC30A4O14863 429 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 MDM4O15151 490 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 HSPA12AO43301 675 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 TSPAN1O60635 241 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 GCNT3O95395 438 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 EEF2P13639 858 aaKnown RBP4.29□□□□□ -1.72
USP47-211ENST00000531513 UGT1A1P22309 533 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 GNLYP22749 145 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 APOBEC1P41238 236 aaKnown RBP4.29□□□□□ -1.72
USP47-211ENST00000531513 MTHFRP42898 656 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 FASLGP48023 281 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 SELENOVP59797 346 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 CDK3Q00526 305 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 NR1D2Q14995 579 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 RRS1Q15050 365 aaKnown RBP4.29□□□□□ -1.72
USP47-211ENST00000531513 TTC31Q49AM3 519 aaPredicted RBP4.29□□□□□ -1.72
USP47-211ENST00000531513 Q5PR19 223 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 SHEQ5VZ18 495 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 FRG2Q64ET8 278 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 MON1BQ7L1V2 547 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 PALB2Q86YC2 1186 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 DSELQ8IZU8 1212 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 ZNF619Q8N2I2 560 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 EMC1Q8N766 993 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 RHBDF1Q96CC6 855 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 ORAI1Q96D31 301 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 TBC1D31Q96DN5 1066 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 LMLNQ96KR4 655 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 AK8Q96MA6 479 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 SLC22A12Q96S37 553 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 SEMA3CQ99985 751 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 INPP5KQ9BT40 448 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 KATNB1Q9BVA0 655 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
USP47-211ENST00000531513 CNGB3Q9NQW8 809 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 ERAP1Q9NZ08 941 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 ODF2LQ9ULJ1 636 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms