RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IZUMO3Q5VZ72 239 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 SLC6A19Q695T7 634 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 JMJD6Q6NYC1 403 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 DAAM2Q86T65 1068 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MAP7D3Q8IWC1 876 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 SLC25A41Q8N5S1 370 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 OR1L3Q8NH93 324 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 TUBB2BQ9BVA1 445 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 TLR10Q9BXR5 811 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 WWP1Q9H0M0 922 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 RAD18Q9NS91 495 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 PCMTD2Q9NV79 361 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 HRASLS2Q9NWW9 162 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 SLC24A2Q9UI40 661 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 CNTRLQ7Z7A1 2325 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 NUP210LQ5VU65 1888 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-201ENST00000526271 H3BMH7 237 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 APOL1O14791 398 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 VPS4BO75351 444 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 PBLDP30039 288 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-201ENST00000526271 SPAM1P38567 509 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 DYNLT1P63172 113 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 HSD11B2P80365 405 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 ACY1Q03154 408 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 PDK1Q15118 436 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.18
CPSF1-201ENST00000526271 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 SLC35G2Q8TBE7 412 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 THAP4Q8WY91 577 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 MR1Q95460 341 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 RANBP9Q96S59 729 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 KCND1Q9NSA2 647 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 IMP3Q9NV31 184 aaKnown RBP13.9□□□□□ -0.18
CPSF1-201ENST00000526271 SMOXQ9NWM0 555 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 VPS4AQ9UN37 437 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 APCP25054 2843 aa13.9□□□□□ -0.18
CPSF1-201ENST00000526271 FBN2P35556 2912 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 OR6C74A6NCV1 312 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 MEN1O00255 615 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CPNE3O75131 537 aaKnown RBP13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CNOT3O75175 753 aaKnown RBP13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CTSBP07858 339 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 H2AFZP0C0S5 128 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 TMEM253P0C7T8 217 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CDKN2BP42772 138 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 XIAPP98170 497 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 SLC18A3Q16572 532 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CRB2Q5IJ48 1285 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 FNBP1LQ5T0N5 605 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 H2AFVQ71UI9 128 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 DET1Q7L5Y6 550 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 ZNF567Q8N184 647 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 GDAP1Q8TB36 358 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 LRFN5Q96NI6 719 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 CD180Q99467 661 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 KIR3DX1Q9H7L2 352 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPSF1-201ENST00000526271 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
CPSF1-201ENST00000526271 GLYATL1P3A0A0U1RQE8 302 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 SLC9B1P1A6NJY1 282 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 AGAP14A8MT82 685 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 BTN3A3O00478 584 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 ZNF185O15231 689 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 KCNJ13O60928 360 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 KLF7O75840 302 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 TMEM63AO94886 807 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 LDLRP01130 860 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 KRT1P04264 644 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 PVRP15151 417 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 ST6GAL1P15907 406 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 CDC25BP30305 580 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 HALP42357 657 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 TBX2Q13207 712 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 RAPSNQ13702 412 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 PLCL1Q15111 1095 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 PTCHD3Q3KNS1 767 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 PLEKHN1Q494U1 663 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 SPOCD1Q6ZMY3 1216 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 BPHLQ86WA6 291 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 TMEM126BQ8IUX1 230 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 GLIS1Q8NBF1 620 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 BRSK1Q8TDC3 778 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 C12orf66Q96MD2 445 aa13.88□□□□□ -0.19
CPSF1-201ENST00000526271 ZNF830Q96NB3 372 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-201ENST00000526271 CHP1Q99653 195 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms