RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 FAM86B1E9PN63 330 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 RTCAO00442 366 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 TIMM23O14925 209 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF263O14978 683 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 KCNN4O15554 427 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 SPINT2O43291 252 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 RTN2O75298 545 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 MED24O75448 989 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 VNN2O95498 520 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 OLFM2O95897 454 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CRYABP02511 175 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 FGF2P09038 288 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 FAM86B2P0C5J1 330 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 HLA-DPA1P20036 260 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CCKARP32238 428 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CRKLP46109 303 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ADARP55265 1226 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 HNRNPH2P55795 449 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CTTNQ14247 550 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 PRTGQ2VWP7 1150 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 TWISTNBQ3B726 338 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 DNTTIP2Q5QJE6 756 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 SFMBT2Q5VUG0 894 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 PARM1Q6UWI2 310 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 TRAPPC11Q7Z392 1133 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 NUP54Q7Z3B4 507 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 HOOK3Q86VS8 718 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CHERPQ8IWX8 916 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF619Q8N2I2 560 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM199Q8N511 208 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CCDC47Q96A33 483 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ORAI1Q96D31 301 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 OR6C1Q96RD1 312 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 PARK7Q99497 189 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 INPP5KQ9BT40 448 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ACAT2Q9BWD1 397 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 MOV10L1Q9BXT6 1211 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 WNT5BQ9H1J7 359 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 ABCB8Q9NUT2 735 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CNIH4Q9P003 139 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 RCC2Q9P258 522 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 CDC14AQ9UNH5 594 aa4.43□□□□□ -1.7
CSDE1-211ENST00000525970 SRPRBQ9Y5M8 271 aaKnown RBP4.43□□□□□ -1.7
CSDE1-211ENST00000525970 A0A1W2PP11 408 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ANKRD28O15084 1053 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SSX4O60224 188 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZIC3O60481 467 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 KERAO60938 352 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 RAB40ALP0C0E4 278 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 TCF4P15884 667 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 TAF1P21675 1872 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 KCNA5P22460 613 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 GABRA5P31644 462 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 MTHFRP42898 656 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF75DP51815 510 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 YBEYP58557 167 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZP1P60852 638 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ASIC1P78348 528 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 PRKCZQ05513 592 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 WASHC5Q12768 1159 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 TROAPQ12815 778 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 DCAF12L2Q5VW00 463 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SHEQ5VZ18 495 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZDHHC20Q5W0Z9 365 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 C18orf63Q68DL7 685 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SLC27A1Q6PCB7 646 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZBTB49Q6ZSB9 765 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 Q6ZSV7 163 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 C11orf57Q6ZUT1 292 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-211ENST00000525970 MON1BQ7L1V2 547 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 DET1Q7L5Y6 550 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 EMC1Q8N766 993 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SLC4A11Q8NBS3 891 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 DBF4BQ8NFT6 615 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 CTCFLQ8NI51 663 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-211ENST00000525970 DNASE1L2Q92874 299 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SPDL1Q96EA4 605 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 AK8Q96MA6 479 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 FEVQ99581 238 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 KATNB1Q9BVA0 655 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF350Q9GZX5 532 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 FZD3Q9NPG1 666 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 MCM9Q9NXL9 1143 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 ERAP1Q9NZ08 941 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 SNX7Q9UNH6 387 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 NME7Q9Y5B8 376 aa4.42□□□□□ -1.7
CSDE1-211ENST00000525970 FAM90A10PA6NDY2 464 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 CD8B2A6NJW9 211 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM189-UBE2V1I3L0A0 370 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 ASAP2O43150 1006 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 NDUFS7O75251 213 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 EPN2O95208 641 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PNPP00491 289 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 GNAZP19086 355 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 BDKRB2P30411 391 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 GMPSP49915 693 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms