RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	SERPINB11	Q96P15	392 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF300	Q96RE9	604 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZBTB18	Q99592	522 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	KATNBL1	Q9H079	304 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	MOV10	Q9HCE1	1003 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	KLHL3	Q9UH77	587 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	VPS9D1	Q9Y2B5	631 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	IFT52	Q9Y366	437 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARL5A	Q9Y689	179 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	PATJ	Q8NI35	1801 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ELOVL7	A1L3X0	281 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141		J3KR12	359 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	PRKD3	O94806	890 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	GSN	P06396	782 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ODC1	P11926	461 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	RHOQ	P17081	205 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL1RN	P18510	177 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	AKT1	P31749	480 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	DCT	P40126	519 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	SELENBP1	Q13228	472 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	HABP4	Q5JVS0	413 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	TUBA3E	Q6PEY2	450 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141		Q6ZSR9	355 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	LRRC8D	Q7L1W4	858 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	AKAP14	Q86UN6	197 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDYL2	Q8N8U2	506 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	RHOXF1	Q8NHV9	184 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARRDC2	Q8TBH0	407 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	C17orf50	Q8WW18	174 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	KLHL5	Q96PQ7	755 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ACBD6	Q9BR61	282 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	CARS2	Q9HA77	564 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	LTB4R2	Q9NPC1	389 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	KCNH4	Q9UQ05	1017 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ERVW-1	Q9UQF0	538 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAM50B	Q9Y247	325 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NPEPPSL1	A6NEC2	478 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NCF1B	A6NI72	391 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NCF1C	A8MVU1	366 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141		H0Y626	953 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDC7	O00311	574 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	CXCR6	O00574	342 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR4F21	O95013	312 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	TRIM16	O95361	564 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	TH	P07101	528 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	G6PD	P11413	515 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NCF1	P14598	390 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	SMPD1	P17405	629 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	AGTR2	P50052	363 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	VBP1	P61758	197 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC35A2	P78381	396 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	CYP4F3	Q08477	520 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NR6A1	Q15406	480 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NKG7	Q16617	165 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	THOC7	Q6I9Y2	204 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAM171B	Q6P995	826 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	C14orf80	Q86SX3	495 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	METTL23	Q86XA0	190 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	DCP2	Q8IU60	420 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	HS3ST5	Q8IZT8	346 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC13A3	Q8WWT9	602 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NSMCE3	Q96MG7	304 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	THUMPD3	Q9BV44	507 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZYG11B	Q9C0D3	744 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	POLR1E	Q9GZS1	481 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	DSN1	Q9H410	356 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	DUSP21	Q9H596	190 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	SCUBE2	Q9NQ36	999 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	TMEM248	Q9NWD8	314 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	GALP	Q9UBC7	116 aa		10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-225	ENST00000524141	TTC34	A8MYJ7	566 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAM47E-STBD1	D6RA91	191 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	E2F3	O00716	465 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	AREL1	O15033	823 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	ANKRD28	O15084	1053 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	XPNPEP2	O43895	674 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	RECQL5	O94762	991 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	BMP1	P13497	986 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	IGFBP6	P24592	240 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PBX3	P40426	434 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	EIF2D	P41214	584 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CLCNKB	P51801	687 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CRYBB1	P53674	252 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	HUNK	P57058	714 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	CLCA4	Q14CN2	919 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	NPTX1	Q15818	432 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF181	Q2M3W8	571 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	FBXO48	Q5FWF7	155 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	DSG4	Q86SJ6	1040 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	GPSM1	Q86YR5	675 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	SNX29P2	Q8IUI4	249 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PLD3	Q8IV08	490 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR13C4	Q8NGS5	318 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR10A6	Q8NH74	314 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLIRP	Q9GZT3	109 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	ACTL8	Q9H568	366 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	VAPA	Q9P0L0	249 aa		10.1	□□□□□ -0.79
SPIDR-225	ENST00000524141	UGT2A1	Q9Y4X1	527 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms