RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 Q8NA96 180 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 GLIS1Q8NBF1 620 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 CPLX3Q8WVH0 158 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 ZFPM2Q8WW38 1151 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 ZNF501Q96CX3 271 aaPredicted RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SMAD5Q99717 465 aaKnown RBP11.21□□□□□ -0.61
MRPS28-206ENST00000520946 C17orf62Q9BQA9 187 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 WWP1Q9H0M0 922 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SRMSQ9H3Y6 488 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 UBP1Q9NZI7 540 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 ACSL5Q9ULC5 683 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 SRPK3Q9UPE1 567 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 HEBP2Q9Y5Z4 205 aa11.21□□□□□ -0.61
MRPS28-206ENST00000520946 RELNP78509 3460 aa11.21□□□□□ -0.62
MRPS28-206ENST00000520946 GLYATL1P3A0A0U1RQE8 302 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 E7EQ34 232 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A9O60656 530 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 CBX6O95503 412 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 MT-CYBP00156 380 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SERPING1P05155 500 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 POLBP06746 335 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 CD63P08962 238 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 PYGMP11217 842 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A6P19224 532 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A1P22309 533 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A4P22310 534 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ELAVL4P26378 380 aaKnown RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 HMGCLP35914 325 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ARSEP51690 589 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 KPNA2P52292 529 aaKnown RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 DMPKQ09013 629 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 NCF4Q15080 339 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 PTCHD3Q3KNS1 767 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 FAM69BQ5VUD6 431 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 IRAK1BP1Q5VVH5 260 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ALKBH5Q6P6C2 394 aaKnown RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 APTXQ7Z2E3 356 aaKnown RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 GLT6D1Q7Z4J2 308 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 C11orf96Q7Z7L8 435 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 RFX6Q8HWS3 928 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ZBTB2Q8N680 514 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 PQLC3Q8N755 202 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 CNTD1Q8N815 330 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SLC38A9Q8NBW4 561 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SPATA22Q8NHS9 363 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 BLOC1S5Q8TDH9 187 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 LCN9Q8WX39 176 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 CTNNBL1Q8WYA6 563 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 DCUN1D1Q96GG9 259 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 TCTN2Q96GX1 697 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 RNF157Q96PX1 679 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 TRIB3Q96RU7 358 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 INSM2Q96T92 566 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 DPH2Q9BQC3 489 aaPredicted RBP11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 IL26Q9NPH9 171 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 C1GALT1Q9NS00 363 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 HACD3Q9P035 362 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 NDOR1Q9UHB4 597 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 SLC24A2Q9UI40 661 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 BTRCQ9Y297 605 aa11.2□□□□□ -0.62
MRPS28-206ENST00000520946 MED13Q9UHV7 2174 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 SHANK1Q9Y566 2161 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 ARHGAP10A1A4S6 786 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 MGAT4DA6NG13 374 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 AURKAO14965 403 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 PROSCO94903 275 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 LCA5LO95447 670 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 RALBP11234 206 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 KDELR1P24390 212 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 HADHAP40939 763 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 FOLR3P41439 243 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 CTSCP53634 463 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 TPM4P67936 248 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 SSPNQ14714 243 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 SLC14A2Q15849 920 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 CYP2A13Q16696 494 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 GPRC6AQ5T6X5 926 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 METRNLQ641Q3 311 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 LCN10Q6JVE6 187 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 ZNF517Q6ZMY9 492 aaPredicted RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 FAM83HQ6ZRV2 1179 aaPredicted RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 RBM43Q6ZSC3 357 aaKnown RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 BZW1Q7L1Q6 419 aaKnown RBP11.19□□□□□ -0.62
MRPS28-206ENST00000520946 CFAP206Q8IYR0 622 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 FERD3LQ96RJ6 166 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 CCM2Q9BSQ5 444 aa11.19□□□□□ -0.62
MRPS28-206ENST00000520946 DHRS4Q9BTZ2 278 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms