RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 COL5A1P20908 1838 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 TRIM49D1C9J1S8 452 aa15.04■□□□□ -0
LSM1-203ENST00000520755 TRIM38O00635 465 aa15.04■□□□□ -0
LSM1-203ENST00000520755 PFDN6O15212 129 aa15.04■□□□□ -0
LSM1-203ENST00000520755 CDH16O75309 829 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ALDOAP04075 364 aaKnown RBP15.04■□□□□ -0
LSM1-203ENST00000520755 GIMD1P0DJR0 217 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ALPPL2P10696 532 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ITGB6P18564 788 aa15.04■□□□□ -0
LSM1-203ENST00000520755 GMPRP36959 345 aa15.04■□□□□ -0
LSM1-203ENST00000520755 MAGEA12P43365 314 aa15.04■□□□□ -0
LSM1-203ENST00000520755 SERPINB9P50453 376 aa15.04■□□□□ -0
LSM1-203ENST00000520755 TAS2R39P59534 338 aa15.04■□□□□ -0
LSM1-203ENST00000520755 LRP8Q14114 963 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ZNF460Q14592 562 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ZKSCAN8Q15776 578 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 KRT71Q3SY84 523 aa15.04■□□□□ -0
LSM1-203ENST00000520755 CEP85LQ5SZL2 805 aa15.04■□□□□ -0
LSM1-203ENST00000520755 MROH9Q5TGP6 573 aa15.04■□□□□ -0
LSM1-203ENST00000520755 PTRHD1Q6GMV3 140 aaKnown RBP15.04■□□□□ -0
LSM1-203ENST00000520755 FAM45BPQ6NSW5 357 aa15.04■□□□□ -0
LSM1-203ENST00000520755 DBX2Q6ZNG2 339 aa15.04■□□□□ -0
LSM1-203ENST00000520755 CMC1Q7Z7K0 106 aa15.04■□□□□ -0
LSM1-203ENST00000520755 NRROSQ86YC3 692 aa15.04■□□□□ -0
LSM1-203ENST00000520755 CEP97Q8IW35 865 aa15.04■□□□□ -0
LSM1-203ENST00000520755 FAM46DQ8NEK8 389 aa15.04■□□□□ -0
LSM1-203ENST00000520755 OR4C6Q8NH72 309 aa15.04■□□□□ -0
LSM1-203ENST00000520755 FAM45AQ8TCE6 357 aa15.04■□□□□ -0
LSM1-203ENST00000520755 KCNJ9Q92806 393 aa15.04■□□□□ -0
LSM1-203ENST00000520755 FAM136AQ96C01 138 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ELMO2Q96JJ3 720 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ZNF514Q96K75 400 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 ROPN1BQ9BZX4 212 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 OSGEPL1Q9H4B0 414 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ROPN1Q9HAT0 212 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 KLC4Q9NSK0 619 aa15.04■□□□□ -0
LSM1-203ENST00000520755 NLGN3Q9NZ94 848 aa15.04■□□□□ -0
LSM1-203ENST00000520755 FAM8A1Q9UBU6 413 aa15.04■□□□□ -0
LSM1-203ENST00000520755 DNAJC16Q9Y2G8 782 aa15.04■□□□□ -0
LSM1-203ENST00000520755 CFAP54Q96N23 3096 aa15.04■□□□□ -0
LSM1-203ENST00000520755 ARID1BQ8NFD5 2236 aaPredicted RBP15.04■□□□□ -0
LSM1-203ENST00000520755 TLDC2A0PJX2 215 aa15.03■□□□□ -0
LSM1-203ENST00000520755 PRR19A6NJB7 356 aa15.03■□□□□ -0
LSM1-203ENST00000520755 SIGLEC6O43699 453 aa15.03■□□□□ -0
LSM1-203ENST00000520755 POP7O75817 140 aaKnown RBP15.03■□□□□ -0
LSM1-203ENST00000520755 OR56A5P0C7T3 313 aa15.03■□□□□ -0
LSM1-203ENST00000520755 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
LSM1-203ENST00000520755 CLCN7P51798 805 aa15.03■□□□□ -0
LSM1-203ENST00000520755 NAPRTQ6XQN6 538 aa15.03■□□□□ -0
LSM1-203ENST00000520755 SDR16C5Q8N3Y7 309 aa15.03■□□□□ -0
LSM1-203ENST00000520755 RIBC1Q8N443 379 aaPredicted RBP15.03■□□□□ -0
LSM1-203ENST00000520755 LILRA3Q8N6C8 439 aaPredicted RBP15.03■□□□□ -0
LSM1-203ENST00000520755 DEFB124Q8NES8 71 aa15.03■□□□□ -0
LSM1-203ENST00000520755 CD200R1Q8TD46 325 aa15.03■□□□□ -0
LSM1-203ENST00000520755 LINC00615Q96LM1 132 aaPredicted RBP15.03■□□□□ -0
LSM1-203ENST00000520755 GPR21Q99679 349 aa15.03■□□□□ -0
LSM1-203ENST00000520755 TIMM29Q9BSF4 260 aa15.03■□□□□ -0
LSM1-203ENST00000520755 DUSP23Q9BVJ7 150 aa15.03■□□□□ -0
LSM1-203ENST00000520755 DPEP2Q9H4A9 486 aa15.03■□□□□ -0
LSM1-203ENST00000520755 TAAR2Q9P1P5 351 aa15.03■□□□□ -0
LSM1-203ENST00000520755 SIRPGQ9P1W8 387 aa15.03■□□□□ -0
LSM1-203ENST00000520755 SLC23A2Q9UGH3 650 aa15.03■□□□□ -0
LSM1-203ENST00000520755 PCOLCE2Q9UKZ9 415 aa15.03■□□□□ -0
LSM1-203ENST00000520755 SLC39A10Q9ULF5 831 aa15.03■□□□□ -0
LSM1-203ENST00000520755 GPR34Q9UPC5 381 aa15.03■□□□□ -0
LSM1-203ENST00000520755 COMMD10Q9Y6G5 202 aa15.03■□□□□ -0
LSM1-203ENST00000520755 IKBKGQ9Y6K9 419 aa15.03■□□□□ -0
LSM1-203ENST00000520755 B4DGG1 531 aa15.02■□□□□ -0
LSM1-203ENST00000520755 H3BMM5 538 aa15.02■□□□□ -0
LSM1-203ENST00000520755 TPP1O14773 563 aa15.02■□□□□ -0
LSM1-203ENST00000520755 PHGDHO43175 533 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 SNX2O60749 519 aa15.02■□□□□ -0
LSM1-203ENST00000520755 KRT38O76015 456 aa15.02■□□□□ -0
LSM1-203ENST00000520755 SNRPAP09012 282 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 MYF5P13349 255 aa15.02■□□□□ -0
LSM1-203ENST00000520755 VCLP18206 1134 aa15.02■□□□□ -0
LSM1-203ENST00000520755 CD9P21926 228 aa15.02■□□□□ -0
LSM1-203ENST00000520755 CNTFP26441 200 aa15.02■□□□□ -0
LSM1-203ENST00000520755 CCR7P32248 378 aa15.02■□□□□ -0
LSM1-203ENST00000520755 GBX1Q14549 363 aa15.02■□□□□ -0
LSM1-203ENST00000520755 TNFAIP8L3Q5GJ75 292 aa15.02■□□□□ -0
LSM1-203ENST00000520755 C6orf132Q5T0Z8 1188 aa15.02■□□□□ -0
LSM1-203ENST00000520755 ZCCHC8Q6NZY4 707 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 LVRNQ6Q4G3 990 aa15.02■□□□□ -0
LSM1-203ENST00000520755 TMEM207Q6UWW9 146 aa15.02■□□□□ -0
LSM1-203ENST00000520755 FAM83HQ6ZRV2 1179 aaPredicted RBP15.02■□□□□ -0
LSM1-203ENST00000520755 TAOK1Q7L7X3 1001 aa15.02■□□□□ -0
LSM1-203ENST00000520755 PIP4P1Q86T03 277 aa15.02■□□□□ -0
LSM1-203ENST00000520755 AMZ2Q86W34 360 aa15.02■□□□□ -0
LSM1-203ENST00000520755 SIDT2Q8NBJ9 832 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 CNDP2Q96KP4 475 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 CCDC68Q9H2F9 335 aa15.02■□□□□ -0
LSM1-203ENST00000520755 SLC32A1Q9H598 525 aa15.02■□□□□ -0
LSM1-203ENST00000520755 SNX15Q9NRS6 342 aa15.02■□□□□ -0
LSM1-203ENST00000520755 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
LSM1-203ENST00000520755 FTSJ1Q9UET6 329 aa15.02■□□□□ -0
LSM1-203ENST00000520755 VWA7Q9Y334 891 aa15.02■□□□□ -0
LSM1-203ENST00000520755 IQANK1A0A1B0GTG1 560 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 A0A1W2PPM1 405 aa15.01□□□□□ -0.01
LSM1-203ENST00000520755 QSOX1O00391 747 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms