RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PAQR3Q6TCH7 311 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ABRAXAS1Q6UWZ7 409 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CYHR1Q6ZMK1 362 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CMC1Q7Z7K0 106 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 C17orf82Q86X59 251 aaPredicted RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 TDRPQ86YL5 185 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CFAP206Q8IYR0 622 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 NAGSQ8N159 534 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 FSTL5Q8N475 847 aaPredicted RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 SPDYE1Q8NFV5 336 aaPredicted RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 EPS8L3Q8TE67 593 aaKnown RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 ANKRD49Q8WVL7 239 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 KCNJ9Q92806 393 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ISL2Q96A47 359 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ELMO2Q96JJ3 720 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 RMDN2Q96LZ7 410 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ZIM3Q96PE6 472 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 EDEM2Q9BV94 578 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 SPASTQ9UBP0 616 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 FAM8A1Q9UBU6 413 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ZNF180Q9UJW8 692 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 IKZF3Q9UKT9 509 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 PCOLCE2Q9UKZ9 415 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CORO1CQ9ULV4 474 aaPredicted RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 PLAAQ9Y263 795 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 COMMD10Q9Y6G5 202 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ANKRD12Q6UB98 2062 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 UQCRHLA0A096LP55 91 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 H3BM21 787 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 H3BMM5 538 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 QSOX1O00391 747 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 PFDN6O15212 129 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 KCNJ13O60928 360 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 FTH1P02794 183 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ALDOAP04075 364 aaKnown RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 UQCRHP07919 91 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 GSTM1P09488 218 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 CTSEP14091 401 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 CHRM3P20309 590 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SPRP35270 261 aaPredicted RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 MSH2P43246 934 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SLCO1A2P46721 670 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ARRB1P49407 418 aaPredicted RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 GSTM4Q03013 218 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ZNF844Q08AG5 666 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ILF3Q12906 894 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLN8-202ENST00000517514 DLG1Q12959 904 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 BOP1Q14137 746 aaKnown RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 ELOCQ15369 112 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 MAP9Q49MG5 647 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 PLEKHS1Q5SXH7 462 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 MROH9Q5TGP6 573 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 AGAP9Q5VTM2 703 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 FAM45BPQ6NSW5 357 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 DUS1LQ6P1R4 473 aaKnown RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 IYDQ6PHW0 289 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 OGFOD3Q6PK18 319 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 WASH2PQ6VEQ5 465 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SH2D5Q6ZV89 423 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 TAF8Q7Z7C8 310 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 CPNE9Q8IYJ1 553 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SLC22A15Q8IZD6 547 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 GPR156Q8NFN8 814 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 GABPB2Q8TAK5 448 aaPredicted RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 FAM45AQ8TCE6 357 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ELMO1Q92556 727 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ZBTB9Q96C00 473 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 INSM2Q96T92 566 aaPredicted RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 NRTNQ99748 197 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 TMEM109Q9BVC6 243 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 WWP1Q9H0M0 922 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SARS2Q9NP81 518 aaKnown RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 WASH6PQ9NQA3 447 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ZNF624Q9P2J8 865 aaPredicted RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 KLHL42Q9P2K6 505 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SLC24A2Q9UI40 661 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 PSMD13Q9UNM6 376 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 RUVBL2Q9Y230 463 aaKnown RBP9.68□□□□□ -0.86
CLN8-202ENST00000517514 PCDHGB2Q9Y5G2 931 aa9.68□□□□□ -0.86
CLN8-202ENST00000517514 ASXL3Q9C0F0 2248 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 RP1P56715 2156 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 OR52A4PA6NMU1 304 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 C4orf47A7E2U8 309 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 TRIM49D1C9J1S8 452 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 TPP1O14773 563 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 LIN7AO14910 233 aaPredicted RBP9.67□□□□□ -0.86
CLN8-202ENST00000517514 CASC3O15234 703 aaKnown RBP9.67□□□□□ -0.86
CLN8-202ENST00000517514 YKT6O15498 198 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 FFAR2O15552 330 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 PHGDHO43175 533 aaKnown RBP9.67□□□□□ -0.86
CLN8-202ENST00000517514 CBFA2T3O75081 653 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 ERLIN1O75477 346 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 RFPL1O75677 317 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 SLC35E2BP0CK96 405 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 TPBGLP0DKB5 382 aa9.67□□□□□ -0.86
CLN8-202ENST00000517514 RPL10P27635 214 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms