RNA–Protein interactions for RNA: ENST00000516348.1

RNU6-479P-201, Transcript of RNA, U6 small nuclear 479, pseudogene, humanhuman

BASIC

Gene RNU6-479P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-479P-201ENST00000516348 ERVK-11Q9UQG0 969 aa0.22□□□□□ -2.37
RNU6-479P-201ENST00000516348 CEP83Q9Y592 693 aa0.22□□□□□ -2.37
RNU6-479P-201ENST00000516348 CSNK1G3Q9Y6M4 447 aa0.22□□□□□ -2.37
RNU6-479P-201ENST00000516348 KMT2DO14686 5537 aa0.22□□□□□ -2.37
RNU6-479P-201ENST00000516348 PER2O15055 1255 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 SEPT4O43236 478 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 BCL10O95999 233 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 MT-CYBP00156 380 aaPredicted RBP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 IGKV1-17P01599 117 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 U2AF1L5P0DN76 240 aaPredicted RBP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 U2AF1Q01081 240 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 OS9Q13438 667 aaPredicted RBP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 HLTFQ14527 1009 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 VEPH1Q14D04 833 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 KLHL26Q53HC5 615 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 IRGCQ6NXR0 463 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 HAUS6Q7Z4H7 955 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 PHC2Q8IXK0 858 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 MARVELD2Q8N4S9 558 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF540Q8NDQ6 660 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 DNAAF4Q8WXU2 420 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 CNOT9Q92600 299 aaKnown RBP0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 STAMQ92783 540 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 TBCBQ99426 244 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 GTF3C4Q9UKN8 822 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 PLEKHA6Q9Y2H5 1048 aa0.21□□□□□ -2.38
RNU6-479P-201ENST00000516348 LOC105371242A0A075B767 164 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 PRDM1O75626 825 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 GCNT3O95395 438 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 TNFSF4P23510 183 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 AP2B1P63010 937 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 LRRC63Q05C16 580 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF658BQ4V348 819 aaPredicted RBP0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 SIGIRRQ6IA17 410 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 ABI3BPQ7Z7G0 1075 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 OR4N5Q8IXE1 308 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 NIPA2Q8N8Q9 360 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 FLVCR1-AS1Q8TAF5 88 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 HSD17B8Q92506 261 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 RBM17Q96I25 401 aaKnown RBP0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 NSL1Q96IY1 281 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 LGMNQ99538 433 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 MAP3K3Q99759 626 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 PABPC3Q9H361 631 aaKnown RBP0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 EPHX3Q9H6B9 360 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 Q9UF83 564 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 FAM96BQ9Y3D0 163 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 PCDHGB2Q9Y5G2 931 aa0.2□□□□□ -2.38
RNU6-479P-201ENST00000516348 KLF18A0A0U1RQI7 1052 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 TFECO14948 347 aaPredicted RBP0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 TMCC2O75069 709 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 SH3BGRLO75368 114 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF44P15621 663 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 SERPINF1P36955 418 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 PMELP40967 661 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 ABCE1P61221 599 aaKnown RBP0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 FOXD4Q12950 439 aaPredicted RBP0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 MAD2L1Q13257 205 aaPredicted RBP0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 COL28A1Q2UY09 1125 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 CES4AQ5XG92 561 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 CORO6Q6QEF8 472 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF589Q86UQ0 364 aaPredicted RBP0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZFAND4Q86XD8 727 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 PAF1Q8N7H5 531 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 MAGEB6Q8N7X4 407 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 OR6S1Q8NH40 331 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 PANK2Q9BZ23 570 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 USP44Q9H0E7 712 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 POGZQ7Z3K3 1410 aa0.19□□□□□ -2.38
RNU6-479P-201ENST00000516348 IGHV4-30-2A0A087WSY4 118 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 A0A0G2JLM5 398 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 VSTM5A8MXK1 200 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 CCNDBP1O95273 360 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 IGKV1D-16P01601 117 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 IGHEP01854 428 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 HEXAP06865 529 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 CD1EP15812 388 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 RBM5P52756 815 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 PLA2G7Q13093 441 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 SF3A2Q15428 464 aaKnown RBP0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 TAF11Q15544 211 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF667Q5HYK9 610 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 LYSMD4Q5XG99 296 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 RINLQ6ZS11 566 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 DENND5BQ6ZUT9 1274 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 G2E3Q7L622 706 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 TMEM139Q8IV31 216 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 OR1J1Q8NGS3 322 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 FAM71BQ8TC56 605 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 AFAP1L1Q8TED9 768 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 RNF138Q8WVD3 245 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 SMPDL3BQ92485 455 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 KIAA1191Q96A73 305 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 GCC1Q96CN9 775 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 FAM122AQ96E09 287 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 CNRIP1Q96F85 164 aaPredicted RBP0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 ZNF670Q9BS34 389 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 UBAC1Q9BSL1 405 aa0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 IFIH1Q9BYX4 1025 aaKnown RBP0.18□□□□□ -2.38
RNU6-479P-201ENST00000516348 GPN1Q9HCN4 374 aaPredicted RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms