RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ARF3P61204 181 aaPredicted RBP3.54□□□□□ -1.84
LINC01088-211ENST00000515597 ARF1P84077 181 aaKnown RBP3.54□□□□□ -1.84
LINC01088-211ENST00000515597 ITGA9Q13797 1035 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 EIF4A2Q14240 407 aaKnown RBP3.54□□□□□ -1.84
LINC01088-211ENST00000515597 PCGF3Q3KNV8 242 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 C4orf50Q6ZRC1 276 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 TPRG1Q6ZUI0 275 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 IKBIPQ70UQ0 350 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 HIST3H2AQ7L7L0 130 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 TICAM1Q8IUC6 712 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 TEX11Q8IYF3 940 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 TMTC2Q8N394 836 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 SMPDL3BQ92485 455 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 C1orf74Q96LT6 269 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 SLC38A7Q9NVC3 462 aa3.54□□□□□ -1.84
LINC01088-211ENST00000515597 R3HDM2Q9Y2K5 976 aaKnown RBP3.54□□□□□ -1.84
LINC01088-211ENST00000515597 RIMS1Q86UR5 1692 aaKnown RBP3.54□□□□□ -1.84
LINC01088-211ENST00000515597 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 FLT1P17948 1338 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SRCAPQ6ZRS2 3230 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 A0A087X002 238 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 DUXAA6NLW8 204 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SLC22A2O15244 555 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 CLIC2O15247 247 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 USO1O60763 962 aaKnown RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 BMP10O95393 424 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 KRT19P08727 400 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 ACTN1P12814 892 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 GNAZP19086 355 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 HOXA13P31271 388 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 GPR143P51810 404 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 DSCR10P59022 87 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 DCAF7P61962 342 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 IRX1P78414 480 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 CRYMQ14894 314 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 NDUFAF5Q5TEU4 345 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SNX30Q5VWJ9 437 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 ACSM2BQ68CK6 577 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 FAM109BQ6ICB4 259 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 KLHL35Q6PF15 583 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 MFSD6Q6ZSS7 791 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 STXBP4Q6ZWJ1 553 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 ZNF534Q76KX8 674 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 PTOV1Q86YD1 416 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SPAG16Q8N0X2 631 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 LYG1Q8N1E2 194 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 HCAR2Q8TDS4 363 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SCFD2Q8WU76 684 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 USP6NLQ92738 828 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 ZKSCAN4Q969J2 545 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 TIGD1Q96MW7 591 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 PSD2Q9BQI7 771 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 RAD21L1Q9H4I0 556 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 EIF2B3Q9NR50 452 aaKnown RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 OGFRQ9NZT2 677 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 CORO1CQ9ULV4 474 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-211ENST00000515597 B3GALT5Q9Y2C3 310 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 SESN1Q9Y6P5 492 aa3.53□□□□□ -1.84
LINC01088-211ENST00000515597 TEX13DA0A0J9YY54 714 aaPredicted RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 TMEM8BA6NDV4 472 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 A6NL46 340 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 J3QR06 171 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 TMCC2O75069 709 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ZBED4O75132 1171 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GPC4O75487 556 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 LIFP15018 202 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ANXA7P20073 488 aaKnown RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 LUMP51884 338 aaPredicted RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GALCP54803 685 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 NAP1L1P55209 391 aaKnown RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GAGE2EQ4V326 116 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GKAP1Q5VSY0 366 aaPredicted RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GAGE2AQ6NT46 116 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 SUSD1Q6UWL2 747 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 CEP97Q8IW35 865 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 HJURPQ8NCD3 748 aaPredicted RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GSDMBQ8TAX9 411 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ART5Q96L15 291 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 CMTM3Q96MX0 182 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 NUDCD1Q96RS6 583 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ITPAQ9BY32 194 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ERVMER34-1Q9H9K5 563 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 GAGE2DQ9UEU5 116 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 DBNLQ9UJU6 430 aaKnown RBP3.52□□□□□ -1.85
LINC01088-211ENST00000515597 ABCA10Q8WWZ4 1543 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 PLB1Q6P1J6 1458 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 CUL7Q14999 1698 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 PTPRTO14522 1441 aa3.52□□□□□ -1.85
LINC01088-211ENST00000515597 RUSC2Q8N2Y8 1516 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 H3BQ06 376 aaPredicted RBP3.51□□□□□ -1.85
LINC01088-211ENST00000515597 OGG1O15527 345 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 ZBTB43O43298 467 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 GPR137BO60478 399 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 ZNF821O75541 412 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms