RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 DGKAP23743 735 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 HNRNPKP61978 463 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 KIR2DS5Q14953 304 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 SNAPC1Q16533 368 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 KYNUQ16719 465 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 CBWD6Q4V339 395 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 CBWD3Q5JTY5 395 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 C9orf152Q5JTZ5 239 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 FOXL2NBQ6ZUU3 175 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 KCTD8Q6ZWB6 473 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 PTOV1Q86YD1 416 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 CIARTQ8N365 385 aaPredicted RBP4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 TC2NQ8N9U0 490 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 LINC00615Q96LM1 132 aaPredicted RBP4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 CTAGE1Q96RT6 745 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 GPR88Q9GZN0 384 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 DPAGT1Q9H3H5 408 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 OLAHQ9NV23 265 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 HAO2Q9NYQ3 351 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 WDR35Q9P2L0 1181 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF580Q9UK33 172 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 TRBC2A0A5B9 178 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 DENND3A2RUS2 1198 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 DVL1O14640 695 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 XRCC3O43542 346 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 OR10H2O60403 315 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 GPR137BO60478 399 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 NR1D1P20393 614 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 IL15P40933 162 aaPredicted RBP4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 CCR3P51677 355 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 CDK3Q00526 305 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 ALCAMQ13740 583 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 SIRPB2Q5JXA9 342 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF852Q6ZMS4 543 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 CAMKMTQ7Z624 323 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 TDRD5Q8NAT2 981 aaKnown RBP4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 TEKT4Q8WW24 435 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 CD101Q93033 1021 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 NAF1Q96HR8 494 aaKnown RBP4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 ABHD6Q9BV23 337 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 ANKRD2Q9GZV1 360 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 TBC1D17Q9HA65 648 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 ABCF3Q9NUQ8 709 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 DONSONQ9NYP3 566 aa4.87□□□□□ -1.63
HMGCS1-207ENST00000514610 A0A0B4J293 547 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 A0A1W2PS18 150 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 TCRBV21S2A2A0A5A6 115 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 BUB3O43684 328 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CTSVO60911 334 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 BAG4O95429 457 aaKnown RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 LDLRP01130 860 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 ACP2P11117 423 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CSF2RAP15509 400 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF23P17027 643 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CBLP22681 906 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 MC5RP33032 325 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CAPZA2P47755 286 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 PITX1P78337 314 aaPredicted RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 MBTD1Q05BQ5 628 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 PLA2G7Q13093 441 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 PRPF4BQ13523 1007 aaKnown RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 LETM2Q2VYF4 491 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 RNASEH2BQ5TBB1 312 aaKnown RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 GRTP1Q5TC63 336 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 NDUFAF5Q5TEU4 345 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 C6orf163Q5TEZ5 329 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 RUSC1-AS1Q66K80 236 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 WBP2NLQ6ICG8 309 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 KLC3Q6P597 504 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 PACS1Q6VY07 963 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 C9orf139Q6ZV77 190 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 LONP2Q86WA8 852 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CEP57L1Q8IYX8 460 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 CRYBG2Q8N1P7 616 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 RFLNBQ8N5W9 214 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 DAZLQ92904 295 aaKnown RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 SPACA9Q96E40 222 aaPredicted RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 ABHD8Q96I13 439 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 LRRC1Q9BTT6 524 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 MOV10L1Q9BXT6 1211 aaKnown RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 EQTNQ9NQ60 294 aa4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 SPIN1Q9Y657 262 aaPredicted RBP4.86□□□□□ -1.63
HMGCS1-207ENST00000514610 A0A1W2PPM1 405 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 ANKUB1A6NFN9 424 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 URADA6NGE7 173 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 C15orf62A8K5M9 175 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 C16orf97H3BN30 126 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 CAPN9O14815 690 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 SYNGR3O43761 229 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 XPNPEP2O43895 674 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 SYNCRIPO60506 623 aaKnown RBP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TBX10O75333 385 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 MED24O75448 989 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TADA2AO75478 443 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 PDE9AO76083 593 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 SLCO2B1O94956 709 aa4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 TRUB2O95900 331 aaKnown RBP4.85□□□□□ -1.63
HMGCS1-207ENST00000514610 IGHV4-39P01824 125 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms