RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RPUSD3Q6P087 351 aaKnown RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 WDR59Q6PJI9 974 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 TMEM207Q6UWW9 146 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ABRAXAS1Q6UWZ7 409 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 USP45Q70EL2 814 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 NOP9Q86U38 636 aaKnown RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 TC2NQ8N9U0 490 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 MAGEB10Q96LZ2 347 aaPredicted RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 OR2AG1Q9H205 316 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 CARD9Q9H257 536 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 CATSPERBQ9H7T0 1116 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 SP110Q9HB58 689 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
NUP54-211ENST00000512151 GPATCH2LQ9NWQ4 482 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 AIPL1Q9NZN9 384 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 FZD10Q9ULW2 581 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 BTRCQ9Y297 605 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ZKSCAN5Q9Y2L8 839 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 ATRQ13535 2644 aa8.87□□□□□ -0.99
NUP54-211ENST00000512151 UBA6A0AVT1 1052 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 DFFAO00273 331 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CLDN7O95471 211 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 PEX11BO96011 259 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 PYGLP06737 847 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 C8BP07358 591 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CBSLP0DN79 551 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FOSL1P15407 271 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CYP11B1P15538 503 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ZNF7P17097 686 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 CBSP35520 551 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ARCN1P48444 511 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 KPNA2P52292 529 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 NOMO3P69849 1222 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 AIMP2Q13155 320 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 TRIM14Q14142 442 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 IHHQ14623 411 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 RFTN1Q14699 578 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 LBRQ14739 615 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 PLCL1Q15111 1095 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 TDRD12Q587J7 1177 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 HENMT1Q5T8I9 393 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 MLIPQ5VWP3 458 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 TRIM72Q6ZMU5 477 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ZNF547Q8IVP9 402 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CHDHQ8NE62 594 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 OR1N1Q8NGS0 311 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CXorf40BQ96DE9 158 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ARSGQ96EG1 525 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 NUDCD1Q96RS6 583 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 SYT11Q9BT88 431 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 SLC6A20Q9NP91 592 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 TINAGQ9UJW2 476 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FBXL4Q9UKA2 621 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 MYO6Q9UM54 1294 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 LUC7L2Q9Y383 392 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 A0A1W2PQ67 120 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 OR5K3A6NET4 321 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 TMEM150CB9EJG8 249 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 C9J4A7 227 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 AKR1B15C9JRZ8 316 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 CHUKO15111 745 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FANCGO15287 622 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FGF10O15520 208 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 FZD6O60353 706 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 KLHL18O94889 574 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ZBTB11O95625 1053 aaPredicted RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 IGHEP01854 428 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FOLR3P41439 243 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 RENBPP51606 427 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 SMSP52788 366 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 MAXP61244 160 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 IL10RBQ08334 325 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 INSCQ1MX18 579 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ARMC12Q5T9G4 340 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 AGAP9Q5VTM2 703 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 AGAP7PQ5VUJ5 663 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 PRAMEF13Q5VWM6 474 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 FAAH2Q6GMR7 532 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 LINC00696Q6ZRV3 163 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ADGRG6Q86SQ4 1221 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 RBM12BQ8IXT5 1001 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 OR8K1Q8NGG5 319 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 SLC20A1Q8WUM9 679 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 IQCDQ96DY2 449 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 AGAP4Q96P64 663 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 PCDHB18PQ96TA0 734 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CD180Q99467 661 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 DNAJC7Q99615 494 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 CHP1Q99653 195 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 NDC1Q9BTX1 674 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 DHRS4Q9BTZ2 278 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 PDCL3Q9H2J4 239 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 HAUS4Q9H6D7 363 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 ABHD10Q9NUJ1 306 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 SOHLH2Q9NX45 425 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 IMPACTQ9P2X3 320 aa8.86□□□□□ -0.99
NUP54-211ENST00000512151 NOCTQ9UK39 431 aaKnown RBP8.86□□□□□ -0.99
NUP54-211ENST00000512151 PADI2Q9Y2J8 665 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms