RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CLIC4Q9Y696 253 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ARID2Q68CP9 1835 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CPED1A4D0V7 1026 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 KRBA1A5PL33 1030 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ST8SIA3O43173 380 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PMPCBO75439 489 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 STX11O75558 287 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 AP2A2O94973 939 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PTBP3O95758 552 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CFIP05156 583 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ASGR1P07306 291 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HGFP14210 728 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HNRNPLP14866 589 aaKnown RBP eCLIP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NPPBP16860 134 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 YWHAEP62258 255 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 WHAMMP3Q1A5X7 153 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 RPUSD3Q6P087 351 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PACS1Q6VY07 963 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 FAM151AQ8WW52 585 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ORAI1Q96D31 301 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CCDC51Q96ER9 411 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 RNFT2Q96EX2 444 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 EGFL8Q99944 293 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TRAF4Q9BUZ4 470 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SEMA4CQ9C0C4 833 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HIPK2Q9H2X6 1198 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PCDH9Q9HC56 1237 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 UBE2TQ9NPD8 197 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TMLHEQ9NVH6 421 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PSD3Q9NYI0 1048 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TXNDC16Q9P2K2 825 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SLC12A6Q9UHW9 1150 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TUBD1Q9UJT1 453 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PSMD13Q9UNM6 376 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 F5H697 171 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CASKO14936 926 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CTDSPLO15194 276 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MLYCDO95822 493 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ABHD2P08910 425 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PSMB10P40306 273 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HK3P52790 923 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SUCLG1P53597 346 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 COPB1P53618 953 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MADCAM1Q13477 382 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 DPYSQ14117 519 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 NR1I3Q14994 352 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PITRM1Q5JRX3 1037 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 KIAA1755Q5JYT7 1200 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PLEKHS1Q5SXH7 462 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CDCP2Q5VXM1 449 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PLA2G4FQ68DD2 849 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ESRP1Q6NXG1 681 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 IGF2-ASQ6U949 168 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 IL20RBQ6UXL0 311 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SYT10Q6XYQ8 523 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SMIM15Q7Z3B0 74 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MON1AQ86VX9 555 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 AMIGO1Q86WK6 493 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CARFQ8N187 725 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF786Q8N393 782 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF516Q92618 1163 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TIMP4Q99727 224 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SRSF8Q9BRL6 282 aaKnown RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MSTO1Q9BUK6 570 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SHCBP1LQ9BZQ2 653 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CCDC90BQ9GZT6 254 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 TM9SF3Q9HD45 589 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 MAN2C1Q9NTJ4 1040 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 RMND1Q9NWS8 449 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SLC2A8Q9NY64 477 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CNTNAP1P78357 1384 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SERTM2A0A1B0GWG4 89 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 N4BP3O15049 544 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 IL1BP01584 269 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 F11P03951 625 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 YES1P07947 543 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CYP2D6P10635 497 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 DRD4P21917 467 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 GABRA5P31644 462 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ARR3P36575 388 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CDC42EP1Q00587 391 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 GBE1Q04446 702 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 COL9A3Q14050 684 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-209ENST00000508871 FAM83EQ2M2I3 478 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 HEPHL1Q6MZM0 1159 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SMIM5Q71RC9 77 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 POLNQ7Z5Q5 900 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ANKS1BQ7Z6G8 1248 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CAMK1DQ8IU85 385 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ADPRHL1Q8NDY3 354 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 LILRB4Q8NHJ6 448 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 ACTRT2Q8TDY3 377 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 CCDC120Q96HB5 630 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 GLT1D1Q96MS3 346 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SENP2Q9HC62 589 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 PLSCR4Q9NRQ2 329 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 FKBP14Q9NWM8 211 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 SOHLH2Q9NX45 425 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 GRHL1Q9NZI5 618 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 IMPACTQ9P2X3 320 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms