RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HSD17B14Q9BPX1 270 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NPHS2Q9NP85 383 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CDC14AQ9UNH5 594 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OR1A2Q9Y585 309 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 DOCK3Q8IZD9 2030 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 A0A087WUV0 522 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 A8MUI8 341 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 WWP2O00308 870 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RAD51BO15315 384 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CTIFO43310 598 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TNFSF14O43557 240 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HCRTO43612 131 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TLX3O43711 291 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SGTAO43765 313 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 LEFTY1O75610 366 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SUPT7LO94864 414 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 DLDP09622 509 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM153BP0C7A2 387 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FDPSP14324 419 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SPINK2P20155 84 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PAICSP22234 425 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CD27P26842 260 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FDFT1P37268 417 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ADH7P40394 386 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ACTR1BP42025 376 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NDST2P52849 883 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CDH13P55290 713 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ACTR1AP61163 376 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RPS14P62263 151 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF33AQ06730 810 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ACSM2AQ08AH3 577 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HSPA14Q0VDF9 509 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CRYMQ14894 314 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AP5B1Q2VPB7 878 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C14orf28Q4W4Y0 310 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 IER5LQ5T953 404 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C22orf39Q6P5X5 142 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RPTNQ6XPR3 784 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ATG14Q6ZNE5 492 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CAND1Q86VP6 1230 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KRT73Q86Y46 540 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF555Q8NEP9 628 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SMPDL3BQ92485 455 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NAT6Q93015 286 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NKD1Q969G9 470 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C17orf62Q9BQA9 187 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MRPL1Q9BYD6 325 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 S1PR5Q9H228 398 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC40Q9H9A6 602 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RXFP1Q9HBX9 757 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PCDH9Q9HC56 1237 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 EXOSC4Q9NPD3 245 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SPATS2LQ9NUQ6 558 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RARRES3Q9UL19 164 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC12A4Q9UP95 1085 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RAI2Q9Y5P3 530 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1B0GW55 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GOLGA8KD6RF30 607 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM189-UBE2V1I3L0A0 370 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PSMD9O00233 223 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 EPN2O95208 641 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CPSF4O95639 269 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GSRP00390 522 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CST3P01034 146 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 IGHEP01854 428 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 GLI1P08151 1106 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 RPS17P08708 135 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L4P0CJ87 422 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 VAV1P15498 845 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TCEA1P23193 301 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 INPP5AQ14642 412 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF77Q15935 545 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 C2orf76Q3KRA6 126 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM154Q6P9G4 183 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 IYDQ6PHW0 289 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 Q6ZS52 159 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 EPM2AIP1Q7L775 607 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PEG10Q86TG7 708 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PRSS58Q8IYP2 241 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PCDH20Q8N6Y1 951 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 OR7D4Q8NG98 312 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF563Q8TA94 476 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 BCL7CQ8WUZ0 217 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 FATE1Q969F0 183 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MTFMTQ96DP5 389 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC126Q96EE4 140 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 CDRT15Q96T59 188 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 YIPF4Q9BSR8 244 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM121Q9BTD3 319 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SLC17A9Q9BYT1 436 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 PITPNM3Q9BZ71 974 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 MRPS30Q9NP92 439 aaKnown RBP2.91□□□□□ -1.94
NEDD4-208ENST00000508342 AGPAT4Q9NRZ5 378 aa2.91□□□□□ -1.94
NEDD4-208ENST00000508342 SPTLC3Q9NUV7 552 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms