RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FAM181AQ8N9Y4 354 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 CCL4L1Q8NHW4 92 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 MAPK15Q8TD08 544 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 SLC44A1Q8WWI5 657 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 SH3KBP1Q96B97 665 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 SYTL2Q9HCH5 934 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 SMYD2Q9NRG4 433 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 ZNF180Q9UJW8 692 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 DHRS7Q9Y394 339 aa19.69■□□□□ 0.74
USP53-203ENST00000507597 FAM95CA0A1B0GW59 222 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 KRT37O76014 449 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 RPN2P04844 631 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 GABRB3P28472 473 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 ATP5DP30049 168 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 CCR7P32248 378 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 KRT33BQ14525 404 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 USP10Q14694 798 aaKnown RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 NAA30Q147X3 362 aaPredicted RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 TCEA2Q15560 299 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 MICALCLQ6ZW33 695 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 KANSL1Q7Z3B3 1105 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 TRIM48Q8IWZ4 208 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 RBM12BQ8IXT5 1001 aaKnown RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 KRT222Q8N1A0 295 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 ARL10Q8N8L6 244 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 UHMK1Q8TAS1 419 aaKnown RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 HNRNPLLQ8WVV9 542 aaKnown RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 PAFAH2Q99487 392 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 POPDC3Q9HBV1 291 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 FAM8A1Q9UBU6 413 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 TBC1D29Q9UFV1 150 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 PLEKHM1Q9Y4G2 1056 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 PCYT1BQ9Y5K3 369 aaPredicted RBP19.68■□□□□ 0.74
USP53-203ENST00000507597 PSAT1Q9Y617 370 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 COLEC10Q9Y6Z7 277 aa19.68■□□□□ 0.74
USP53-203ENST00000507597 IQANK1A0A1B0GTG1 560 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 SLC5A10A0PJK1 596 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 IQCF5A8MTL0 148 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 B4DGG1 531 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 NIPSNAP2O75323 286 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 LDOC1O95751 146 aaPredicted RBP19.67■□□□□ 0.74
USP53-203ENST00000507597 HSD17B3P37058 310 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 DAB2P98082 770 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 NR0B2Q15466 257 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 ZNF549Q6P9A3 640 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 TTC23LQ6PF05 361 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 IYDQ6PHW0 289 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 CROCCP2Q86T23 111 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 NAXDQ8IW45 347 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 CXorf40BQ96DE9 158 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 MTBPQ96DY7 904 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 MRRFQ96E11 262 aaKnown RBP19.67■□□□□ 0.74
USP53-203ENST00000507597 CCDC97Q96F63 343 aaPredicted RBP19.67■□□□□ 0.74
USP53-203ENST00000507597 ATXN7L3BQ96GX2 97 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 GPR22Q99680 433 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.67■□□□□ 0.74
USP53-203ENST00000507597 RXFP3Q9NSD7 469 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 GULP1Q9UBP9 304 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 FTSJ1Q9UET6 329 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 GPR179Q6PRD1 2367 aa19.67■□□□□ 0.74
USP53-203ENST00000507597 GDF9O60383 454 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 GPC4O75487 556 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 SLCO2B1O94956 709 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 C1QAP02745 245 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 CELA2BP08218 269 aaPredicted RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 ITGA2BP08514 1039 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 CD59P13987 128 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 STMN1P16949 149 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 SAT1P21673 171 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 RPL10P27635 214 aaKnown RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 DNAJC3Q13217 504 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 NEK10Q6ZWH5 1172 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 NKAPQ8N5F7 415 aaKnown RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 MAGEC3Q8TD91 643 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 SKA2Q8WVK7 121 aaPredicted RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 ZFPM2Q8WW38 1151 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 NAT6Q93015 286 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 NDNQ99608 321 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 GPR21Q99679 349 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 ROPN1BQ9BZX4 212 aaPredicted RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 ROPN1Q9HAT0 212 aaPredicted RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 PRDM8Q9NQV8 689 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 POT1Q9NUX5 634 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 SLC17A6Q9P2U8 582 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 CDV3Q9UKY7 258 aaKnown RBP19.66■□□□□ 0.74
USP53-203ENST00000507597 SLC39A10Q9ULF5 831 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 OTOGLQ3ZCN5 2332 aa19.66■□□□□ 0.74
USP53-203ENST00000507597 PABPN1LA6NDY0 278 aaKnown RBP19.65■□□□□ 0.74
USP53-203ENST00000507597 PRR19A6NJB7 356 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 VIPP01282 170 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 SNRPAP09012 282 aaKnown RBP19.65■□□□□ 0.74
USP53-203ENST00000507597 NUDT17P0C025 328 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 XRCC1P18887 633 aaPredicted RBP19.65■□□□□ 0.74
USP53-203ENST00000507597 CRABP2P29373 138 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 CLCN7P51798 805 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 IL2P60568 153 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 SEPT7Q16181 437 aaKnown RBP19.65■□□□□ 0.74
USP53-203ENST00000507597 C14orf28Q4W4Y0 310 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 SLC22A15Q8IZD6 547 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 GPR156Q8NFN8 814 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms