RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SERPINA9Q86WD7 417 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF761Q86XN6 746 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 TRIM48Q8IWZ4 208 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 RBM12BQ8IXT5 1001 aaKnown RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 GSPT2Q8IYD1 628 aaKnown RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 OR13J1Q8NGT2 312 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 OR2L2Q8NH16 312 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 PEX13Q92968 403 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 LRRC39Q96DD0 335 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 SGF29Q96ES7 293 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 PRR11Q96HE9 360 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 CMKLR1Q99788 373 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 SEMA6CQ9H3T2 930 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 ZDHHC3Q9NYG2 299 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF624Q9P2J8 865 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-203ENST00000505756 LOXL2Q9Y4K0 774 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 KNTC1P50748 2209 aa11.2□□□□□ -0.62
KDM3B-203ENST00000505756 IGLV3-16A0A075B6K0 115 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 IGHV5-10-1A0A0J9YXX1 117 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TCRBV7S3A2A0A539 114 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CCDC78A2IDD5 438 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PMS2P1A4D2B8 440 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 HGSO14964 777 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 RRP8O43159 456 aaKnown RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 SGTAO43765 313 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TNFSF15O95150 251 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 ITGA2BP08514 1039 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 JMJD7P0C870 316 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 THRAP10827 490 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PBLDP30039 288 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CSF2RBP32927 897 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PPM1FP49593 454 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PRLHRP49683 370 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 ARSDP51689 593 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 LIMK2P53671 638 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PCBP4P57723 403 aaKnown RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CFHR1Q03591 330 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 ACVR1Q04771 509 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TRA2AQ13595 282 aaKnown RBP eCLIP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 NFE2L1Q14494 772 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 HIF1AQ16665 826 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TSTD2Q5T7W7 516 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 METRNLQ641Q3 311 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TMEM71Q6P5X7 295 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 LRRC8BQ6P9F7 803 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 WDR74Q6RFH5 385 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF574Q6ZN55 896 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 FAM83HQ6ZRV2 1179 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TMEM26Q6ZUK4 368 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TAS2R42Q7RTR8 314 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CAND1Q86VP6 1230 aaKnown RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 BEND7Q8N7W2 519 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 PPHLN1Q8NEY8 458 aaKnown RBP11.19□□□□□ -0.62
KDM3B-203ENST00000505756 CXorf40BQ96DE9 158 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 FUT8Q9BYC5 575 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 ZMYND15Q9H091 742 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 VPS37BQ9H9H4 285 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 SLC40A1Q9NP59 571 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 TCAF1Q9Y4C2 921 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 LAMA5O15230 3695 aa11.19□□□□□ -0.62
KDM3B-203ENST00000505756 C17orf113A0A1B0GUU1 675 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CCDC162PA2VCL2 907 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 OR52A4PA6NMU1 304 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CDRT15L2A8MXV6 281 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ATP8B1O43520 1251 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ABHD2P08910 425 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PRSS56P0CW18 603 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 FOXN2P32314 431 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 NPY2RP49146 381 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ARL4CP56559 192 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ITIH4Q14624 930 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CLCA4Q14CN2 919 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 C16orf72Q14CZ0 275 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 KCTD19Q17RG1 926 aaPredicted RBP11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PCID2Q5JVF3 399 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 LYPLAL1Q5VWZ2 237 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 CENPUQ71F23 418 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 TRMT10CQ7L0Y3 403 aaKnown RBP11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PIANPQ8IYJ0 282 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 ZNF248Q8NDW4 579 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 NAT14Q8WUY8 206 aa11.18□□□□□ -0.62
KDM3B-203ENST00000505756 HDAC10Q969S8 669 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms