RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PREPP48147 710 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 LMAN1P49257 510 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CTSCP53634 463 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 FOXL2P58012 376 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 KLHL30Q0D2K2 578 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TMEM115Q12893 351 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 PRKAA1Q13131 559 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 DPYSL3Q14195 570 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 KRT33BQ14525 404 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 MYBPC3Q14896 1274 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC9A5Q14940 896 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 PAFAH1B3Q15102 231 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 PPP2R5EQ16537 467 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 HIF1AQ16665 826 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 HADHQ16836 314 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ATP13A5Q4VNC0 1218 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ATP13A4Q4VNC1 1196 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CT47A1Q5JQC4 288 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 FNBP1LQ5T0N5 605 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 SWT1Q5T5J6 900 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 C1orf189Q5VU69 101 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 MLIPQ5VWP3 458 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TMEM220Q6QAJ8 160 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 FAM151BQ6UXP7 276 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ZNF517Q6ZMY9 492 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TMC3Q7Z5M5 1100 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CUZD1Q86UP6 607 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 NT5DC3Q86UY8 548 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 LRRC49Q8IUZ0 686 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 BEND7Q8N7W2 519 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CNTD1Q8N815 330 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 RASGEF1AQ8N9B8 481 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CLEC1AQ8NC01 280 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 KCTD6Q8NC69 237 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TM9SF4Q92544 642 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CNDP1Q96KN2 507 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 FER1L6-AS2Q96M78 137 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ZNF830Q96NB3 372 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TSGA13Q96PP4 275 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 TRAPPC9Q96Q05 1148 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ZCCHC2Q9C0B9 1178 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 WWP1Q9H0M0 922 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CBX8Q9HC52 389 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ZBTB20Q9HC78 741 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 LATS2Q9NRM7 1088 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 AGPAT4Q9NRZ5 378 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 C5AR2Q9P296 337 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 NFKBIL1Q9UBC1 381 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 LIMA1Q9UHB6 759 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 AMACRQ9UHK6 382 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC24A2Q9UI40 661 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 ENTPD4Q9Y227 616 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 PTRH2Q9Y3E5 179 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 SPO11Q9Y5K1 396 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CSAG2Q9Y5P2 127 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 E7EQ34 232 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 BUD23O43709 281 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 UGT1A9O60656 530 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ALOX12BO75342 701 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 PMPCBO75439 489 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 IPO13O94829 963 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 MT-CYBP00156 380 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 CAPN1P07384 714 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC35G4P0C7Q5 338 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 MYBL1P10243 752 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 SKILP12757 684 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 PVRP15151 417 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ST6GAL1P15907 406 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 UGT1A6P19224 532 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 AGXTP21549 392 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 UGT1A1P22309 533 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 UGT1A4P22310 534 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ITGA3P26006 1051 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 MYL5Q02045 173 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 AP1B1Q10567 949 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC10A2Q12908 348 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 NOMO1Q15155 1222 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ZRSR2Q15696 482 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ZNF789Q5FWF6 425 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 DCAF10Q5QP82 559 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 CCDC183Q5T5S1 534 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 SP5Q6BEB4 398 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 B4GALNT4Q76KP1 1039 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 FJX1Q86VR8 437 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 GALNT16Q8N428 558 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ST6GALNAC3Q8NDV1 305 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 OR4E2Q8NGC2 313 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 GRHL3Q8TE85 626 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 N4BP2L2Q92802 583 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 HDAC11Q96DB2 347 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 RMDN2Q96LZ7 410 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 AGAP3Q96P47 875 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 VPS35Q96QK1 796 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 TRIB3Q96RU7 358 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 INSM2Q96T92 566 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 ZNF670Q9BS34 389 aa6.7□□□□□ -1.34
NPIPB3-203ENST00000504841 THAP2Q9H0W7 228 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms