RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CADM4Q8NFZ8 388 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 SYN2Q92777 582 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 ERGIC1Q969X5 290 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CCDC47Q96A33 483 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 PPM1MQ96MI6 270 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 NAPGQ99747 312 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 CARD6Q9BX69 1037 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 ZMYND12Q9H0C1 365 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 GLT8D2Q9H1C3 349 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 PCDH9Q9HC56 1237 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 ASAH2Q9NR71 780 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CWC15Q9P013 229 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 ZNF112Q9UJU3 913 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 FBXO9Q9UK97 447 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 AAR2Q9Y312 384 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 DDX60LQ5H9U9 1706 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 KDM3AQ9Y4C1 1321 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 CTAGE15A4D2H0 777 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 EIF3CLB5ME19 914 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 PRR23D1E9PI22 279 aaPredicted RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 KRT86O43790 486 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 RFPL2O75678 378 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SEC14L2O76054 403 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 RPN1P04843 607 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 LDHCP07864 332 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 CTAGE8P0CG41 777 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 PRR23D2P0DMB1 279 aaPredicted RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 CCNE1P24864 410 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 GNA11P29992 359 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SHMT1P34896 483 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 CYLC1P35663 651 aaPredicted RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 PIGAP37287 484 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 ZBED6P86452 979 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 LRRC63Q05C16 580 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 POU5F1BQ06416 359 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 DLG1Q12959 904 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 TNFAIP1Q13829 316 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 DHX34Q14147 1143 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 PDIA5Q14554 519 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SMC1AQ14683 1233 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 OASLQ15646 514 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 C12orf60Q5U649 245 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 GGNBP1Q5YKI7 109 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 WBP2NLQ6ICG8 309 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 LRRC8EQ6NSJ5 796 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 CTR9Q6PD62 1173 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 RHBDF2Q6PJF5 856 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 LCTLQ6UWM7 567 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 PRSS57Q6UWY2 283 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 RAD9BQ6WBX8 426 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 MTSS1LQ765P7 747 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 TAOK1Q7L7X3 1001 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 CTAGE6Q86UF2 777 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 CTAGE4Q8IX94 777 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 BLIDQ8IZY5 108 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 PGBD5Q8N414 524 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 RNF10Q8N5U6 811 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 ZBTB2Q8N680 514 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 LILRB1Q8NHL6 650 aaPredicted RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 HUS1BQ8NHY5 278 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 FAM149B1Q96BN6 582 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 NAP1L4Q99733 375 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 HEMGNQ9BXL5 484 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 PARD6BQ9BYG5 372 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 IFIH1Q9BYX4 1025 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 MKKSQ9NPJ1 570 aaPredicted RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 SAMSN1Q9NSI8 373 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 MCM9Q9NXL9 1143 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 BARHL2Q9NY43 387 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 HAO1Q9UJM8 370 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 PROCRQ9UNN8 238 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 KCNJ14Q9UNX9 436 aa4.77□□□□□ -1.65
SSR3-209ENST00000498205 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
SSR3-209ENST00000498205 CASZ1Q86V15 1759 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 BAZ2AQ9UIF9 1905 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 PRKAB2O43741 272 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 KLRC4O43908 158 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 KRT36O76013 467 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 TMEM63AO94886 807 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 IPO7O95373 1038 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 BAG3O95817 575 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 GCFC2P16383 781 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 MAOAP21397 527 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 EPHA8P29322 1005 aaPredicted RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 CASP14P31944 242 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 KRT9P35527 623 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 TUBP50607 506 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 EFNA5P52803 228 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 RPS8P62241 208 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 RPL7AP62424 266 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms