RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 TP53INP1Q96A56 240 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 FUBP1Q96AE4 644 aaKnown RBP3.07□□□□□ -1.92
SHTN1-206ENST00000497044 CLIP3Q96DZ5 547 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 CAMK1GQ96NX5 476 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 RPRD1AQ96P16 312 aaPredicted RBP3.07□□□□□ -1.92
SHTN1-206ENST00000497044 PPP1R2P1Q96PQ5 205 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 BRD8Q9H0E9 1235 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 FAM207AQ9NSI2 230 aaPredicted RBP3.07□□□□□ -1.92
SHTN1-206ENST00000497044 DTLQ9NZJ0 730 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 NFKBIL1Q9UBC1 381 aaPredicted RBP3.07□□□□□ -1.92
SHTN1-206ENST00000497044 DKK2Q9UBU2 259 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 ATP23Q9Y6H3 246 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 RPS6KL1Q9Y6S9 549 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 DOCK4Q8N1I0 1966 aa3.07□□□□□ -1.92
SHTN1-206ENST00000497044 COL6A3P12111 3177 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 TCRBV5S1A1TA0A578 114 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 ARHGAP42A6NI28 874 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CLCA1A8K7I4 914 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 AKR1B15C9JRZ8 316 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PSMD11O00231 422 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MCF2LO15068 1137 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 EIF3HO15372 352 aaKnown RBP eCLIP3.06□□□□□ -1.922e-7■■□□□ 13.2
SHTN1-206ENST00000497044 CNOT4O95628 575 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 LDLRP01130 860 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 HMBSP08397 361 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MMEP08473 750 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 NUDT17P0C025 328 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 H2AFZP0C0S5 128 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 ZFXP17010 805 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CHRNB2P17787 502 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CA4P22748 312 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 HLA-FP30511 346 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CSKP41240 450 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SLC1A1P43005 524 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 POLE2P56282 527 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 IL2P60568 153 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SNRPD1P62314 119 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 RPS21P63220 83 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 TLE1Q04724 770 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CHRNEQ04844 493 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 EGR3Q06889 387 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CDC20Q12834 499 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 POLD3Q15054 466 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 C3orf36Q3SXR2 165 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 RAP1GAP2Q684P5 730 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 NADSYN1Q6IA69 706 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 DCUN1D2Q6PH85 259 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 H2AFVQ71UI9 128 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PRSS42Q7Z5A4 293 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 IRF2BP2Q7Z5L9 587 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 ZNF683Q8IZ20 524 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 NDUFAF2Q8N183 169 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 UMODL1-AS1Q8N2C9 162 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 ESX1Q8N693 406 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 FAM156AQ8NDB6 213 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SIMC1Q8NDZ2 872 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PPP1R35Q8TAP8 253 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 APOBEC4Q8WW27 367 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PNPLA2Q96AD5 504 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MIEF2Q96C03 454 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PRICKLE1Q96MT3 831 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 RBM15Q96T37 977 aaKnown RBP eCLIP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CTRCQ99895 268 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 CIPCQ9C0C6 399 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 TKTL2Q9H0I9 626 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 C6orf106Q9H6K1 298 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 IL21RQ9HBE5 538 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 DYRK4Q9NR20 520 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 AASDHPPTQ9NRN7 309 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SLC5A6Q9Y289 635 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 HS3ST4Q9Y661 456 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 RGSL1A5PLK6 1076 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 GOLGA6CA6NDK9 693 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 GOLGA6BA6NDN3 693 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 STMND1H3BQB6 276 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 KRT7P08729 469 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 GOLGA6DP0CG33 693 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 RFC1P35251 1148 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 HADHAP40939 763 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PPP2CBP62714 309 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 VSNL1P62760 191 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PPP2CAP67775 309 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MTM1Q13496 603 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 PDK2Q15119 407 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 ELOCQ15369 112 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 GEN1Q17RS7 908 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MST1LQ2TV78 715 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 LRRC38Q5VT99 294 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 AGBL4Q5VU57 503 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SYPL2Q5VXT5 272 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 SPECC1LQ69YQ0 1117 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 TIGD7Q6NT04 549 aaPredicted RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 FBXL22Q6P050 247 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 GJB7Q6PEY0 223 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 MMS22LQ6ZRQ5 1243 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 BZW1Q7L1Q6 419 aaKnown RBP3.06□□□□□ -1.92
SHTN1-206ENST00000497044 POLNQ7Z5Q5 900 aa3.06□□□□□ -1.92
SHTN1-206ENST00000497044 HEATR4Q86WZ0 1026 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms