RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TAS2R13Q9NYV9 303 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 GULP1Q9UBP9 304 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
BRCA1-223ENST00000494123 SIGLEC6O43699 453 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 FAM155BO75949 473 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 F3P13726 295 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 CD59P13987 128 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 AOAHP28039 575 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 PREPP48147 710 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 LIMK1P53667 647 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 LIMK2P53671 638 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 RPA4Q13156 261 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 TTLL9Q3SXZ7 439 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 HECTD2Q5U5R9 776 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 TAOK1Q7L7X3 1001 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 ZBTB2Q8N680 514 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 SIDT2Q8NBJ9 832 aaKnown RBP14.27□□□□□ -0.12
BRCA1-223ENST00000494123 NETO1Q8TDF5 533 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 GPR21Q99679 349 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 EPB41L4BQ9H329 900 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.12
BRCA1-223ENST00000494123 BTBD3Q9Y2F9 522 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 VWA7Q9Y334 891 aa14.27□□□□□ -0.12
BRCA1-223ENST00000494123 GVINP1Q7Z2Y8 2422 aa14.27□□□□□ -0.13
BRCA1-223ENST00000494123 CCDC151A5D8V7 595 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 PRR19A6NJB7 356 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 OR5K4A6NMS3 321 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 IFRD1O00458 451 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 TRIM38O00635 465 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SH3BP5O60239 455 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 GIMD1P0DJR0 217 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 PLA2G5P39877 138 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SKIV2L2P42285 1042 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 BIRC2Q13490 618 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ZNF658BQ4V348 819 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 PLEKHS1Q5SXH7 462 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 AGAP9Q5VTM2 703 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ARL10Q8N8L6 244 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SKA2Q8WVK7 121 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SLC44A1Q8WWI5 657 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 MCMBPQ9BTE3 642 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 WWP1Q9H0M0 922 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SLC39A10Q9ULF5 831 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 MTO1Q9Y2Z2 717 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ASCC3Q8N3C0 2202 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 TRBV23OR9-2A0A075B6M9 112 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SLC5A10A0PJK1 596 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 EML2O95834 649 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ITGA2BP08514 1039 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 RPIAP49247 311 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 SERPINB9P50453 376 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 CLCN7P51798 805 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 CDKN2DP55273 166 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 DAB2P98082 770 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 POU4F1Q01851 419 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 USP10Q14694 798 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 ABRAXAS1Q6UWZ7 409 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 WASH2PQ6VEQ5 465 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 NAGSQ8N159 534 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 MREGQ8N565 214 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 KYQ8NBH2 561 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 MAPK15Q8TD08 544 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 INPP5DQ92835 1189 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 TSPAN17Q96FV3 270 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 APOLD1Q96LR9 279 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 GPR22Q99680 433 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 STN1Q9H668 368 aaKnown RBP14.26□□□□□ -0.13
BRCA1-223ENST00000494123 WASH6PQ9NQA3 447 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 LATS2Q9NRM7 1088 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 EVA1BQ9NVM1 165 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 NCKIPSDQ9NZQ3 722 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 GALPQ9UBC7 116 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 FTSJ1Q9UET6 329 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 PCOLCE2Q9UKZ9 415 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 DHRS7Q9Y394 339 aa14.26□□□□□ -0.13
BRCA1-223ENST00000494123 KIR2DS5A0A0G2JLQ3 304 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 A0A0G2JNG1 304 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 A6NCN8 305 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 KIR2DS3K7RE56 304 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 GPC4O75487 556 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 KRT38O76015 456 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 FDXRP22570 491 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 PDHA2P29803 388 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 IFFO1Q0D2I5 559 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 KIR2DS5Q14953 304 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 C14orf28Q4W4Y0 310 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 MROH9Q5TGP6 573 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 IYDQ6PHW0 289 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 OGFOD3Q6PK18 319 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 ALYREFQ86V81 257 aaKnown RBP14.25□□□□□ -0.13
BRCA1-223ENST00000494123 PIM3Q86V86 326 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 TRIM48Q8IWZ4 208 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 SLC35F3Q8IY50 421 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 ACVR1CQ8NER5 493 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 CD200R1Q8TD46 325 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 PATE1Q8WXA2 126 aa14.25□□□□□ -0.13
BRCA1-223ENST00000494123 CXorf40BQ96DE9 158 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms