RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SEC14L1Q92503 715 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC45A3Q96JT2 553 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 TSSK1BQ9BXA7 367 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 FANCEQ9HB96 536 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 HRASLS2Q9NWW9 162 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 PACSIN2Q9UNF0 486 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 WDR37Q9Y2I8 494 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 PRR19A6NJB7 356 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 AP2A2O94973 939 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 AP2A1O95782 977 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 IFNB1P01574 187 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 FTH1P02794 183 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 LIFP15018 202 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 NELFEP18615 380 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 TCN2P20062 427 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 HSD11B2P80365 405 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 CACNG1Q06432 222 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 RPA4Q13156 261 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 PTPRCAPQ14761 206 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 POU6F1Q14863 301 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 AADACL2Q6P093 401 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 OR8K5Q8NH50 307 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC35B2Q8TB61 432 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 KLHL6Q8WZ60 621 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 NLE1Q9NVX2 485 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 LNPEPQ9UIQ6 1025 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 ANAPC5Q9UJX4 755 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 PADI1Q9ULC6 663 aa16.19■□□□□ 0.18
PDLIM2-217ENST00000491330 ITPR1Q14643 2758 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 HEATR9A2RTY3 570 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 OR5K3A6NET4 321 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 TLCD2A6NGC4 264 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 H7C0S8 307 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 J3QKU1 62 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 NSG1P42857 185 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 LEPRP48357 1165 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 CD151P48509 253 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 PRLHRP49683 370 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 ZNF140P52738 457 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 CCZ1BP86790 482 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 XIAPP98170 497 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 TUBB3Q13509 450 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 TBR1Q16650 682 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 ACVR1CQ8NER5 493 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 LCN9Q8WX39 176 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 RSC1A1Q92681 617 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 FERD3LQ96RJ6 166 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 SRMSQ9H3Y6 488 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 KIR3DX1Q9H7L2 352 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 HOMER3Q9NSC5 361 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 SOHLH2Q9NX45 425 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 OGFRQ9NZT2 677 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 KCTD3Q9Y597 815 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 RPS6KL1Q9Y6S9 549 aa16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-217ENST00000491330 OR6C74A6NCV1 312 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 AGAP14A8MT82 685 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 GAPDHSO14556 408 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 GPR39O43194 453 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 LDB2O43679 373 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 KIAA0754O94854 1291 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 ZBTB11O95625 1053 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 OR56A5P0C7T3 313 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 FGF5P12034 268 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 TPH1P17752 444 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 ACRV1P26436 265 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 NFATC3Q12968 1075 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SYTL3Q4VX76 610 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 DRICH1Q6PGQ1 229 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 PCSK4Q6UW60 755 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 CERS6Q6ZMG9 384 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 FAM83HQ6ZRV2 1179 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 GSTA5Q7RTV2 222 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SERPINA9Q86WD7 417 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 PMEPA1Q969W9 287 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 CDKN2AIPNLQ96HQ2 116 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 ELMO2Q96JJ3 720 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 INSM2Q96T92 566 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC12A9Q9BXP2 914 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC7A5P2Q9GIP4 190 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 FAM96AQ9H5X1 160 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 MVB12BQ9H7P6 319 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SYTL2Q9HCH5 934 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 APMAPQ9HDC9 416 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SIDT1Q9NXL6 827 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SMARCAL1Q9NZC9 954 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 PAK5Q9P286 719 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC24A2Q9UI40 661 aa16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 CFAP20Q9Y6A4 193 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-217ENST00000491330 ZNF106Q9H2Y7 1883 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 LIN7AO14910 233 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 PFDN6O15212 129 aa16.16■□□□□ 0.18
PDLIM2-217ENST00000491330 SLC28A2O43868 658 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms