RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 HACE1Q8IYU2 909 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 KIRREL3Q8IZU9 778 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CPXCR1Q8N123 301 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 C4orf33Q8N1A6 199 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 NME8Q8N427 588 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FSTL5Q8N475 847 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM109AQ8N4B1 249 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FBXO36Q8NEA4 188 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CATSPER1Q8NEC5 780 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AGBL3Q8NEM8 1001 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RFWD2Q8NHY2 731 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DEPTORQ8TB45 409 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SPATA18Q8TC71 538 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACTL9Q8TC94 416 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ADAMTS15Q8TE58 950 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TRPC4APQ8TEL6 797 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AFG1LQ8WV93 481 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DCAKDQ8WVC6 231 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IPCEF1Q8WWN9 437 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SOCS4Q8WXH5 440 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SEPT1Q8WYJ6 367 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CPT1BQ92523 772 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 NCSTNQ92542 709 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 USP6NLQ92738 828 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CDKL2Q92772 493 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SPSB4Q96A44 273 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FAF2Q96CS3 445 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 OXNAD1Q96HP4 312 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 THOC3Q96J01 351 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF48Q96MX3 618 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM210AQ96ND0 272 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF570Q96NI8 536 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 HIST1H2AAQ96QV6 131 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 KCNK16Q96T55 309 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PAFAH2Q99487 392 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MPHOSPH6Q99547 160 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SERPINI1Q99574 410 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF184Q99676 751 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 EBNA1BP2Q99848 306 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CENPKQ9BS16 269 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RTKNQ9BST9 563 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CNPY3Q9BT09 278 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 WACQ9BTA9 647 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM121Q9BTD3 319 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PI4K2AQ9BTU6 479 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 THTPAQ9BU02 230 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SCNM1Q9BWG6 230 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ADGRE3Q9BY15 652 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 KLHL4Q9C0H6 718 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 YIPF3Q9GZM5 350 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IQCGQ9H095 443 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ILKAPQ9H0C8 392 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 WWP1Q9H0M0 922 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PORCNQ9H237 461 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 Q9H521 79 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ASB7Q9H672 318 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 EFCAB1Q9HAE3 211 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AS3MTQ9HBK9 375 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC38A10Q9HBR0 1119 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 S100A14Q9HCY8 104 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 MLXIPLQ9NP71 852 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SLCO1B3Q9NPD5 702 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ACP6Q9NPH0 428 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PXMP2Q9NR77 195 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 NDE1Q9NXR1 346 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 GGA3Q9NZ52 723 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 DLGAP2Q9P1A6 1054 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CPNE7Q9UBL6 633 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 GABBR1Q9UBS5 961 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CHORDC1Q9UHD1 332 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 PGAP2Q9UHJ9 254 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IPO11Q9UI26 975 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 XPO7Q9UIA9 1087 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 VPS28Q9UK41 221 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ITGA11Q9UKX5 1188 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CCPG1Q9ULG6 757 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 RAB26Q9ULW5 256 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SCAF8Q9UPN6 1271 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AGTPBP1Q9UPW5 1226 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 R3HDM2Q9Y2K5 976 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 C2CD2Q9Y426 696 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 AFG3L2Q9Y4W6 797 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SNX13Q9Y5W8 968 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 COMMD3-BMI1R4GMX3 469 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 UMODL1Q5DID0 1318 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 IGSF9BQ9UPX0 1349 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 CITO14578 2027 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 ZMYM2Q9UBW7 1377 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SNED1Q8TER0 1413 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 COL2A1P02458 1487 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 SCN7AQ01118 1682 aa2.06□□□□□ -2.08
SNRNP40-207ENST00000491106 LY75O60449 1722 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 DOT1LQ8TEK3 1739 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 PTPRFP10586 1907 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 MIA3Q5JRA6 1907 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 IGKV2D-30A0A075B6S6 120 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 LOC102723971A0A1B0GUV8 181 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM237BA0A1B0GVD1 139 aa2.05□□□□□ -2.08
SNRNP40-207ENST00000491106 TCRBV9S1A1TA0A576 114 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms