RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 NLNQ9BYT8 704 aa10.52□□□□□ -0.72
PTP4A2-206ENST00000489313 GLOD4Q9HC38 313 aa10.52□□□□□ -0.72
PTP4A2-206ENST00000489313 ASF1BQ9NVP2 202 aa10.52□□□□□ -0.72
PTP4A2-206ENST00000489313 CTTNBP2NLQ9P2B4 639 aa10.52□□□□□ -0.72
PTP4A2-206ENST00000489313 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.72
PTP4A2-206ENST00000489313 CNTRLQ7Z7A1 2325 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 SVILO95425 2214 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 KCNJ13O60928 360 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 SERPING1P05155 500 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 CAPN1P07384 714 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 RAB40ALP0C0E4 278 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 POLR2CP19387 275 aaPredicted RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 HMGCLP35914 325 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 ATP1A4Q13733 1029 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 PPP2R5EQ16537 467 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 KYNUQ16719 465 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 PTCHD3Q3KNS1 767 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 PLEKHN1Q494U1 663 aaPredicted RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 GPRC6AQ5T6X5 926 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 METRNLQ641Q3 311 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 ARMC6Q6NXE6 501 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 CLEC17AQ6ZS10 378 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 DET1Q7L5Y6 550 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 SYTL1Q8IYJ3 562 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 CISD2Q8N5K1 135 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 GLIS1Q8NBF1 620 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 OR8K5Q8NH50 307 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 CPT1BQ92523 772 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 C12orf66Q96MD2 445 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 LRFN5Q96NI6 719 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 ZCCHC2Q9C0B9 1178 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 WWP1Q9H0M0 922 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC24A2Q9UI40 661 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 BTRCQ9Y297 605 aa10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 BZW2Q9Y6E2 419 aaKnown RBP10.52□□□□□ -0.73
PTP4A2-206ENST00000489313 NF1P21359 2839 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 LRRD1A4D1F6 860 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC9B1P1A6NJY1 282 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 F5H423 210 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 CBX6O95503 412 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 RORAP35398 523 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 SPAM1P38567 509 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 CHRNA4P43681 627 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 NR1I3Q14994 352 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 PDK1Q15118 436 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 FIGNQ5HY92 759 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 LDLRAP1Q5SW96 308 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 FNBP1LQ5T0N5 605 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 MED25Q71SY5 747 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 HPS6Q86YV9 775 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 IQCKQ8N0W5 287 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 TMEM102Q8N9M5 508 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 DDHD1Q8NEL9 900 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 OR1L3Q8NH93 324 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 CPLX3Q8WVH0 158 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 OLFM3Q96PB7 478 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 RANBP9Q96S59 729 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 SMAD5Q99717 465 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 LATS2Q9NRM7 1088 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC5A6Q9Y289 635 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 AKAP9Q99996 3911 aa10.51□□□□□ -0.73
PTP4A2-206ENST00000489313 CROCCQ5TZA2 2017 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 A0A0A6YYK5 440 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 GLYATL1P3A0A0U1RQE8 302 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 TMEM150CB9EJG8 249 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 GAPDHSO14556 408 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 CYP2A7P20853 494 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 CDH3P22223 829 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 AKT1P31749 480 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 OTX2P32243 289 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 RRADP55042 308 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 DYNLT1P63172 113 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 NCF4Q15080 339 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC14A2Q15849 920 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 ZNF789Q5FWF6 425 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SIRPB2Q5JXA9 342 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC9A4Q6AI14 798 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SRRM1Q8IYB3 904 aaKnown RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SLC25A41Q8N5S1 370 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 OR4E2Q8NGC2 313 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SYN2Q92777 582 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SGSM3Q96HU1 749 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 C5orf34Q96MH7 638 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 NRTNQ99748 197 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 PACSIN1Q9BY11 444 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 KLHL25Q9H0H3 589 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 KIR3DX1Q9H7L2 352 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 ACTR5Q9H9F9 607 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 FANCEQ9HB96 536 aa10.5□□□□□ -0.73
PTP4A2-206ENST00000489313 IL17CQ9P0M4 197 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms