RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ULBP3Q9BZM4 244 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 TRIT1Q9H3H1 467 aaKnown RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 SRMSQ9H3Y6 488 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 GRPEL1Q9HAV7 217 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 PDE7BQ9NP56 450 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 OCIAD1Q9NX40 245 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 SOHLH2Q9NX45 425 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 BFARQ9NZS9 450 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 LNPEPQ9UIQ6 1025 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 WDR37Q9Y2I8 494 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 JRKLQ9Y4A0 524 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 B3GALT1Q9Y5Z6 326 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 CFAP20Q9Y6A4 193 aaKnown RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 MN1Q10571 1320 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-232ENST00000489053 MYLKQ15746 1914 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 MGAQ8IWI9 3026 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 LOC400499M0QZD8 3231 aa8.93□□□□□ -0.98
HDAC6-232ENST00000489053 UNC13CQ8NB66 2214 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 GSAPA4D1B5 854 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 OR6C74A6NCV1 312 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 K7ENP7 123 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 RAD1O60671 282 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 BRAFP15056 766 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 MAP4P27816 1152 aaKnown RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CXCR5P32302 372 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 TERF1P54274 439 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 SESN2P58004 480 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 XIAPP98170 497 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 MC2RQ01718 297 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 PLOD1Q02809 727 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CFHR1Q03591 330 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 C19orf57Q0VDD7 668 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 RPA4Q13156 261 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 SEMA5AQ13591 1074 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 BOP1Q14137 746 aaKnown RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 TMED2Q15363 201 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CASC4Q6P4E1 433 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 INO80CQ6PI98 192 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CERS6Q6ZMG9 384 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 FAM83HQ6ZRV2 1179 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 ARHGAP22Q7Z5H3 698 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 NLGN4XQ8N0W4 816 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 LSM14AQ8ND56 463 aaKnown RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 NLGN4YQ8NFZ3 816 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 OR4L1Q8NH43 312 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 NAT14Q8WUY8 206 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 ZFPM2Q8WW38 1151 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 ELMO1Q92556 727 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 RSC1A1Q92681 617 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 PBKQ96KB5 322 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 LINC00615Q96LM1 132 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 OR6C1Q96RD1 312 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 IL22Q9GZX6 179 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 GPN2Q9H9Y4 310 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 FANCEQ9HB96 536 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 FBXO8Q9NRD0 319 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 HRASLS2Q9NWW9 162 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 SAMD15Q9P1V8 674 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 PDP2Q9P2J9 529 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 DRG1Q9Y295 367 aaKnown RBP8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CFAP46Q8IYW2 2715 aa8.92□□□□□ -0.98
HDAC6-232ENST00000489053 CCDC162PA2VCL2 907 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 OR5K3A6NET4 321 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TLCD2A6NGC4 264 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 MROH6A6NGR9 719 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 H7C0S8 307 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TK2O00142 265 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 PGRMC1O00264 195 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 MATN2O00339 956 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 LIN7AO14910 233 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ATXN7O15265 892 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 EFSO43281 561 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 NDUFS3O75489 264 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 STK17BO94768 372 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SUN1O94901 812 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 C9P02748 559 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 RPN2P04844 631 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CCNYL3P0C7X3 344 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ETS1P14921 441 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 PAMP19021 973 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CDH3P22223 829 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 RPL22P35268 128 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 LEPRP48357 1165 aaKnown RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 VPS41P49754 854 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CCZ1BP86790 482 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 CCZ1P86791 482 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 MC1RQ01726 317 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ACY1Q03154 408 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TUBB3Q13509 450 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 ITIH4Q14624 930 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 IL11RAQ14626 422 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 BRD3Q15059 726 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 DBN1Q16643 649 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 SOWAHCQ53LP3 525 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-232ENST00000489053 PCID2Q5JVF3 399 aa8.91□□□□□ -0.98
HDAC6-232ENST00000489053 TSTD2Q5T7W7 516 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms