RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CRNNQ9UBG3 495 aaPredicted RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 YIPF1Q9Y548 306 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 PCDHAC2Q9Y5I4 1007 aa3.11□□□□□ -1.91
CD46-215ENST00000488596 ZNF644Q9H582 1327 aaPredicted RBP3.11□□□□□ -1.91
CD46-215ENST00000488596 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 SPRY1O43609 319 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 DIAPH2O60879 1101 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 TFAP2AP05549 437 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 UMODP07911 640 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 ABCB1P08183 1280 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 SNRNP70P08621 437 aaKnown RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 GJA1P17302 382 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 GM2AP17900 193 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 USP8P40818 1118 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 IL15P40933 162 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 CALD1Q05682 793 aaKnown RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 SNAPC1Q16533 368 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 LETM2Q2VYF4 491 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 ZNF718Q3SXZ3 478 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 DHRS7BQ6IAN0 325 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 SLC30A6Q6NXT4 461 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 PLXDC2Q6UX71 529 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 ZNF704Q6ZNC4 412 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 KBTBD3Q8NAB2 608 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 POMGNT2Q8NAT1 580 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 POC1AQ8NBT0 407 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 KCNH5Q8NCM2 988 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 LNX1Q8TBB1 728 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 PPP4R1Q8TF05 950 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 DGAT2Q96PD7 388 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 OR6C1Q96RD1 312 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 NEURL2Q9BR09 285 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 EBF2Q9HAK2 575 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 HAO2Q9NYQ3 351 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 PTTG2Q9NZH5 202 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 WDR35Q9P2L0 1181 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 NFKBIL1Q9UBC1 381 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 RHCGQ9UBD6 479 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 DLGAP4Q9Y2H0 992 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 RPS6KL1Q9Y6S9 549 aa3.1□□□□□ -1.91
CD46-215ENST00000488596 ASTN2O75129 1339 aaPredicted RBP3.1□□□□□ -1.91
CD46-215ENST00000488596 A0A0B4J293 547 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 TEX13DA0A0J9YY54 714 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 PRSS51A0A1B0GVH4 220 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 DENND3A2RUS2 1198 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CTAGE9A4FU28 777 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 URADA6NGE7 173 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 UBE2CO00762 179 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 XRCC3O43542 346 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 SSX4O60224 188 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 SYNCRIPO60506 623 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 TADA2AO75478 443 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 LIPFP07098 398 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CTAGE8P0CG41 777 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 VPREB1P12018 145 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 PSMC4P43686 418 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CAPZA2P47755 286 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 DLX5P56178 289 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 EEF1A1P68104 462 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 SIRPAP78324 504 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 PLA2G7Q13093 441 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 IL11RAQ14626 422 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 MRGPRG-AS1Q2M3A8 158 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 ZNF672Q499Z4 452 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 ERMARDQ5T6L9 678 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 EEF1A1P5Q5VTE0 462 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 PIWIL4Q7Z3Z4 852 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 CAMKMTQ7Z624 323 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 PTOV1Q86YD1 416 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CTAGE4Q8IX94 777 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 ZNF595Q8IYB9 648 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 MUC20Q8N307 709 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 OR2AJ1Q8NGZ0 328 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CFAP61Q8NHU2 1237 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 SNRNP27Q8WVK2 155 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 SECTM1Q8WVN6 248 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 TEKT4Q8WW24 435 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 SMPDL3BQ92485 455 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 CD101Q93033 1021 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 NXNL1Q96CM4 212 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 PGAP3Q96FM1 320 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 LINC00615Q96LM1 132 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 DOCK7Q96N67 2140 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 INPP4AQ96PE3 977 aaPredicted RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 PKP4Q99569 1192 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 FNDC11Q9BVV2 318 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 MRPL1Q9BYD6 325 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 OPA3Q9H6K4 179 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 EVA1AQ9H8M9 152 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 TBC1D17Q9HA65 648 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 KLHL1Q9NR64 748 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 OLAHQ9NV23 265 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 OSER1Q9NX31 292 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
CD46-215ENST00000488596 BCCIPQ9P287 314 aaKnown RBP eCLIP3.09□□□□□ -1.91
CD46-215ENST00000488596 WBP11Q9Y2W2 641 aaKnown RBP3.09□□□□□ -1.91
CD46-215ENST00000488596 ANKRD66B4E2M5 251 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 C16orf97H3BN30 126 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms