RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PCDHGA1Q9Y5H4 931 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 COMMD10Q9Y6G5 202 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 EME2A4GXA9 379 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-219ENST00000488186 IQCF5A8MTL0 148 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 RFPL3O75679 317 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 EML2O95834 649 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 ADRB1P08588 477 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 STX2P32856 288 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 LEPRP48357 1165 aaKnown RBP15.42■□□□□ 0.06
C9orf3-219ENST00000488186 CD151P48509 253 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 CSE1LP55060 971 aaKnown RBP15.42■□□□□ 0.06
C9orf3-219ENST00000488186 ADARP55265 1226 aaKnown RBP15.42■□□□□ 0.06
C9orf3-219ENST00000488186 HSPA14Q0VDF9 509 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 RPA4Q13156 261 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 KYNUQ16719 465 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 GUSBP11Q6P575 273 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 ABRAXAS1Q6UWZ7 409 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 CTAGE3PQ8IX95 158 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 KRT222Q8N1A0 295 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 SFRP1Q8N474 314 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 ASZ1Q8WWH4 475 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 PATE1Q8WXA2 126 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 C12orf66Q96MD2 445 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 SLC38A3Q99624 504 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 WWP1Q9H0M0 922 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 LRRC4CQ9HCJ2 640 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 MOCS1Q9NZB8 636 aa15.42■□□□□ 0.06
C9orf3-219ENST00000488186 ARHGEF17Q96PE2 2063 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-219ENST00000488186 NUDT21O43809 227 aaKnown RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 AHSGP02765 367 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 F7P08709 466 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 FTH1P19P0C7X4 201 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 GPX6P59796 221 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 E2F1Q01094 437 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 HHEXQ03014 270 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 ILKQ13418 452 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 ZNF789Q5FWF6 425 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 CNSTQ6PJW8 725 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 NAPRTQ6XQN6 538 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 CYS1Q717R9 158 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 STRA8Q7Z7C7 330 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 SLC26A11Q86WA9 606 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 SFTPA2Q8IWL1 248 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 Q8N9G6 341 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 SLC37A2Q8TED4 501 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 SKA2Q8WVK7 121 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 CCDC74AQ96AQ1 378 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 BIRC8Q96P09 236 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 SYNDIG1Q9H7V2 258 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 PLAC1Q9HBJ0 212 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 IMP3Q9NV31 184 aaKnown RBP15.41■□□□□ 0.06
C9orf3-219ENST00000488186 CPNE7Q9UBL6 633 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 WDR37Q9Y2I8 494 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 HEBP2Q9Y5Z4 205 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 RNF215Q9Y6U7 377 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 COLEC10Q9Y6Z7 277 aa15.41■□□□□ 0.06
C9orf3-219ENST00000488186 LY6G6EA0A0G2JKS1 128 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 TCRBV9S1A1TA0A576 114 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 OR52A4PA6NMU1 304 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 NIPSNAP2O75323 286 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 VPS26AO75436 327 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 GP1BAP07359 652 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 XRCC1P18887 633 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 AOAHP28039 575 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 ALDH4A1P30038 563 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 CCR7P32248 378 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 PREPP48147 710 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 ACADVLP49748 655 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 SHC2P98077 582 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 CLCA4Q14CN2 919 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 RPE65Q16518 533 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 CTSL3PQ5NE16 218 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 N4BP2L1Q5TBK1 243 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 UGT3A1Q6NUS8 523 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 LILRA3Q8N6C8 439 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 GPATCH11Q8N954 259 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 EIF1ADQ8N9N8 165 aaKnown RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 FBF1Q8TES7 1133 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 FAM136AQ96C01 138 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 AHCYL2Q96HN2 611 aaKnown RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 CCDC3Q9BQI4 270 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 ZMYND15Q9H091 742 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 NINJ2Q9NZG7 142 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 SCHIP1Q9P0W5 487 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 U3KQA8 63 aa15.4■□□□□ 0.06
C9orf3-219ENST00000488186 ZFC3H1O60293 1989 aaKnown RBP15.4■□□□□ 0.06
C9orf3-219ENST00000488186 A6NCN8 305 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 PRR19A6NJB7 356 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 ACSL3O95573 720 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 BRAFP15056 766 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 PNLIPP16233 465 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 MCM3P25205 808 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 ECHS1P30084 290 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 SLC19A1P41440 591 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 TTLL9Q3SXZ7 439 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 PLEKHS1Q5SXH7 462 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms