RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PTPN14Q15678 1187 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 TBCEQ15813 527 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 DECR1Q16698 335 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 USP41Q3LFD5 358 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZC2HC1CQ53FD0 456 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 C1orf141Q5JVX7 400 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 DCST1Q5T197 706 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 IL27RAQ6UWB1 636 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 MFSD6Q6ZSS7 791 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 STXBP4Q6ZWJ1 553 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PIWIL4Q7Z3Z4 852 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PXKQ7Z7A4 578 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLFN11Q7Z7L1 901 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 NUP93Q8N1F7 819 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 POMGNT2Q8NAT1 580 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 RBM15BQ8NDT2 890 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 GSDMBQ8TAX9 411 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 THAP6Q8TBB0 222 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 METTL6Q8TCB7 284 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ARHGEF26Q96DR7 871 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SAAL1Q96ER3 474 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SENP5Q96HI0 755 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PPP1R13BQ96KQ4 1090 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 RAB3IPQ96QF0 476 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 EGFL8Q99944 293 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMEM47Q9BQJ4 181 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 MAK16Q9BXY0 300 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SIL1Q9H173 461 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PCDHB16Q9NRJ7 776 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC6A13Q9NSD5 602 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 TCP11L1Q9NUJ3 509 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SEPT11Q9NVA2 429 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 CHORDC1Q9UHD1 332 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 SARDHQ9UL12 918 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF215Q9UL58 517 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 AGTPBP1Q9UPW5 1226 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 AAR2Q9Y312 384 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 JRKLQ9Y4A0 524 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 IKBKGQ9Y6K9 419 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRSS21Q9Y6M0 314 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 UTYO14607 1347 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 A0A0G2JLW4 131 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 C5orf60A6NFR6 353 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 AGAP14A8MT82 685 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 USP17L23D6RBM5 183 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 BEST1O76090 585 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 TPM2P07951 284 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 HOXB5P09067 269 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 SPARCP09486 303 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CSF2RAP15509 400 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CDAP32320 146 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PEX19P40855 299 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CTCFP49711 727 aaPredicted RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 RAD23AP54725 363 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 RPS3AP61247 264 aaKnown RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 LMO4P61968 165 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PRAMEP78395 509 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 SPOCK1Q08629 439 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 AIMP1Q12904 312 aaKnown RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 LRMPQ12912 555 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 GRIK2Q13002 908 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMEM187Q14656 261 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CRYMQ14894 314 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 DRAP1Q14919 205 aaPredicted RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 MORF4L2Q15014 288 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 KYNUQ16719 465 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZFP69Q49AA0 526 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 DNAJC21Q5F1R6 531 aaKnown RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 C6orf141Q5SZD1 244 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 TATDN1Q6P1N9 297 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF790Q6PG37 636 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CNSTQ6PJW8 725 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 DPPA4Q7L190 304 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC186Q7Z3E2 898 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 SZRD1Q7Z422 152 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 ADGRA1Q86SQ6 560 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 RPAINQ86UA6 219 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 THNSL1Q8IYQ7 743 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CNTROBQ8N137 903 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 CARNMT1Q8N4J0 409 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 TTC39CQ8N584 583 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 GOT1L1Q8NHS2 421 aaPredicted RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 GDAP1Q8TB36 358 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 MGARPQ8TDB4 240 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 SCFD2Q8WU76 684 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 DEPDC1BQ8WUY9 529 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 POMGNT1Q8WZA1 660 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 FAM162AQ96A26 154 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 KLHL29Q96CT2 875 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 NR1H4Q96RI1 486 aaPredicted RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 ACOX2Q99424 681 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PCGF1Q9BSM1 259 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PI4K2AQ9BTU6 479 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 MXD3Q9BW11 206 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 TEX12Q9BXU0 123 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 ITPAQ9BY32 194 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 DNAI2Q9GZS0 605 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 SMARCAD1Q9H4L7 1026 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PDZD7Q9H5P4 517 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PFDN4Q9NQP4 134 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms