RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SLC24A2Q9UI40 661 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 POMT2Q9UKY4 750 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 TMPRSS11EQ9UL52 423 aa15.66■□□□□ 0.1
DDX56-210ENST00000479440 CFAP20Q9Y6A4 193 aaKnown RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 DNMT3AQ9Y6K1 912 aaPredicted RBP15.66■□□□□ 0.1
DDX56-210ENST00000479440 LRBAP50851 2863 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 PRSS44E7EML9 344 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 LRRTM2O43300 516 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 SLC35G4P0C7Q5 338 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 NDUFS1P28331 727 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 FOLR3P41439 243 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 PREPP48147 710 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 PPIDQ08752 370 aaKnown RBP15.65■□□□□ 0.1
DDX56-210ENST00000479440 SSPNQ14714 243 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 SLC14A2Q15849 920 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 ZNF789Q5FWF6 425 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 ZFYVE27Q5T4F4 411 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 DUS1LQ6P1R4 473 aaKnown RBP15.65■□□□□ 0.1
DDX56-210ENST00000479440 MCEMP1Q8IX19 187 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 BEND7Q8N7W2 519 aaPredicted RBP15.65■□□□□ 0.1
DDX56-210ENST00000479440 KCTD6Q8NC69 237 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 DDHD1Q8NEL9 900 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 OR1L3Q8NH93 324 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 IMP4Q96G21 291 aaKnown RBP15.65■□□□□ 0.1
DDX56-210ENST00000479440 WWP1Q9H0M0 922 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 ZNF552Q9H707 407 aaPredicted RBP15.65■□□□□ 0.1
DDX56-210ENST00000479440 BPIFA1Q9NP55 256 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.65■□□□□ 0.1
DDX56-210ENST00000479440 SERTAD3Q9UJW9 196 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 NTNG1Q9Y2I2 539 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 CRYBG3Q68DQ2 2970 aa15.65■□□□□ 0.1
DDX56-210ENST00000479440 GSAPA4D1B5 854 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 SLC9B1P1A6NJY1 282 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 OR2AG2A6NM03 316 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 DDX3YO15523 660 aaKnown RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 LCA5LO95447 670 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 CD63P08962 238 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 POLR2CP19387 275 aaPredicted RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 ITGA3P26006 1051 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 SPAM1P38567 509 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 ARCN1P48444 511 aaKnown RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 CTSCP53634 463 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 LLGL1Q15334 1064 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 METRNLQ641Q3 311 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 FBXO38Q6PIJ6 1188 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 CUZD1Q86UP6 607 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 ZC3H18Q86VM9 953 aaKnown RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 RASGEF1AQ8N9B8 481 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 DTX3LQ8TDB6 740 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 PCSK5Q92824 1860 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 FAF2Q96CS3 445 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 WDR77Q9BQA1 342 aaPredicted RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 THAP2Q9H0W7 228 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 GPN3Q9UHW5 284 aaPredicted RBP15.64■□□□□ 0.09
DDX56-210ENST00000479440 OSGIN2Q9Y236 505 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 HEBP2Q9Y5Z4 205 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 COLEC10Q9Y6Z7 277 aa15.64■□□□□ 0.09
DDX56-210ENST00000479440 CROCCQ5TZA2 2017 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 CENPEQ02224 2701 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 MYO1FO00160 1098 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 E2F3O00716 465 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 LDB2O43679 373 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 ZG16O60844 167 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 NDST3O95803 873 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 EDN3P14138 238 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 AKT1P31749 480 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 HMGCLP35914 325 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 ITGA9Q13797 1035 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 KRT33BQ14525 404 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 LONRF2Q1L5Z9 754 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 E4F1Q66K89 784 aaPredicted RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 SP5Q6BEB4 398 aaPredicted RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 TMEM220Q6QAJ8 160 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 B4GALNT4Q76KP1 1039 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 APTXQ7Z2E3 356 aaKnown RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 PPP4R1Q8TF05 950 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 PPM1MQ96MI6 270 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 INSM2Q96T92 566 aaPredicted RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 SLC25A51Q9H1U9 297 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 TRABDQ9H4I3 376 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 ANO10Q9NW15 660 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 NDOR1Q9UHB4 597 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 ACSL5Q9ULC5 683 aa15.63■□□□□ 0.09
DDX56-210ENST00000479440 NOVA2Q9UNW9 492 aaKnown RBP15.63■□□□□ 0.09
DDX56-210ENST00000479440 AURKAO14965 403 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 ZNF749O43361 778 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 KLF7O75840 302 aaPredicted RBP15.62■□□□□ 0.09
DDX56-210ENST00000479440 PYGMP11217 842 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 TNNT3P45378 269 aaPredicted RBP15.62■□□□□ 0.09
DDX56-210ENST00000479440 LMAN1P49257 510 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 AP1B1Q10567 949 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 SLC10A2Q12908 348 aaPredicted RBP15.62■□□□□ 0.09
DDX56-210ENST00000479440 GSE1Q14687 1217 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 CYP2A13Q16696 494 aa15.62■□□□□ 0.09
DDX56-210ENST00000479440 ZNF385CQ66K41 422 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms