RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 A8MV72 311 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 J3KR12 359 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 UBE2CO00762 179 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 MAP2K7O14733 419 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 SMAD9O15198 467 aaKnown RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 ASAP2O43150 1006 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 GPC4O75487 556 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 TRIM21P19474 475 aaKnown RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 RRM1P23921 792 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 EIF2S3P41091 472 aaKnown RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 FASLGP48023 281 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 LMAN1P49257 510 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 STAT2P52630 851 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 NUDT6P53370 316 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 CXCL9Q07325 125 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 SREBF2Q12772 1141 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 TRAF2Q12933 501 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 GRIK2Q13002 908 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 TNFAIP1Q13829 316 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 RASA2Q15283 850 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 EFNB3Q15768 340 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 PNLIPRP3Q17RR3 467 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 EIF2S3LQ2VIR3 472 aaKnown RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF805Q5CZA5 627 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 BMP2KLQ5H9B9 411 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 FRG2Q64ET8 278 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 C8orf82Q6P1X6 216 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 ARID3BQ8IVW6 561 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 CLIP4Q8N3C7 705 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 MINDY1Q8N5J2 469 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 MIGA1Q8NAN2 632 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCNH5Q8NCM2 988 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 OR8K5Q8NH50 307 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 CEP295NLQ96MC4 621 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 DACH2Q96NX9 599 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 INPP4AQ96PE3 977 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 BAG1Q99933 345 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 KIFC3Q9BVG8 833 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 EPB41L5Q9HCM4 733 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 SLC35C2Q9NQQ7 365 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 ACSS1Q9NUB1 689 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 PAG1Q9NWQ8 432 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 ARHGEF38Q9NXL2 777 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 RCOR1Q9UKL0 485 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 CDC14AQ9UNH5 594 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 PAM16Q9Y3D7 125 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 MAGED1Q9Y5V3 778 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-212ENST00000478573 C4AP0C0L4 1744 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 C4BP0C0L5 1744 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 NSD2O96028 1365 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 LAMB4A4D0S4 1761 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 NSD3Q9BZ95 1437 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 LNP1A1A4G5 178 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 CPED1A4D0V7 1026 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ADAMDEC1O15204 470 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZIC3O60481 467 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCNJ13O60928 360 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ICAM1P05362 532 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 MMP9P14780 707 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF12P17014 697 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TCEA1P23193 301 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 MMP14P50281 582 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMF1P82094 1093 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 GRAPQ13588 217 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCNC3Q14003 757 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 CCDC96Q2M329 555 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM266Q2M3C6 531 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF672Q499Z4 452 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 LCN10Q6JVE6 187 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 FBXL22Q6P050 247 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TAOK1Q7L7X3 1001 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 SCYL3Q8IZE3 742 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMTC2Q8N394 836 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 POMGNT2Q8NAT1 580 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 AVL9Q8NBF6 648 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCTD6Q8NC69 237 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF622Q969S3 477 aaKnown RBP eCLIP3.99□□□□□ -1.774e-8■■□□□ 13.9
CDC42BPA-212ENST00000478573 GCNAQ96QF7 691 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ABHD1Q96SE0 405 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAD1Q99259 594 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 SPRY4Q9C004 299 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 SIL1Q9H173 461 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 PIGMQ9H3S5 423 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 DENND2DQ9H6A0 471 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TCF7L2Q9NQB0 619 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 CPSF2Q9P2I0 782 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 DNAJB4Q9UDY4 337 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 GIMAP2Q9UG22 337 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 OR14J1Q9UGF5 321 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 TTC7AQ9ULT0 858 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF711Q9Y462 761 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 KIF13BQ9NQT8 1826 aa3.99□□□□□ -1.77
CDC42BPA-212ENST00000478573 LOC102723996A0A087X1L8 192 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 M0QZ24 198 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SLC16A5O15375 505 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 AVILO75366 819 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TPOP07202 933 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 G6PDP11413 515 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms